RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 GPR83Q9NYM4 423 aa7.02□□□□□ -1.29
SCN9A-202ENST00000409435 A0A1W2PPC4 97 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 TVP23AA6NH52 213 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 SLC9B1P1A6NJY1 282 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 UGT2B11O75310 529 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 FTH1P19P0C7X4 201 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 PSKH1P11801 424 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 ACTR3P61158 418 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 CTBSQ01459 385 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 CTBP1Q13363 440 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 STK11Q15831 433 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 WSCD2Q2TBF2 565 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 PNCKQ6P2M8 343 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 PTRH1Q86Y79 214 aaKnown RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 POU5F2Q8N7G0 328 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 FAM47BQ8NA70 645 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 OR2AJ1Q8NGZ0 328 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 NANOS1Q8WY41 292 aaKnown RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 CERS2Q96G23 380 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 MRM3Q9HC36 420 aaKnown RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 POT1Q9NUX5 634 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 TAS2R3Q9NYW6 316 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 NUDT4Q9NZJ9 180 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 GNG13Q9P2W3 67 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 LYVE1Q9Y5Y7 322 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 RNF215Q9Y6U7 377 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 A0A0G2JN53 185 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 ZNF705FA8MVS1 300 aaPredicted RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 NPIPA2E9PIF3 369 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 NPIPA3F8WFD2 350 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 M0R233 179 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 SOX1O00570 391 aaPredicted RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 LATO43561 262 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 ZNF705DP0CH99 300 aaPredicted RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 ZNF705BP0CI00 300 aaPredicted RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 CBSLP0DN79 551 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 COX4I1P13073 169 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 ITGA2P17301 1181 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 PSMA1P25786 263 aaKnown RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 CBSP35520 551 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 GRIA3P42263 894 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 CDKN2CP42773 168 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 HK3P52790 923 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 AP2S1P53680 142 aaPredicted RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 SMIM11AP58511 58 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 MAPK14Q16539 360 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 PDK4Q16654 411 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 GFOD2Q3B7J2 385 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 TSTD2Q5T7W7 516 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 TMEM211Q6ICI0 200 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 RTL4Q6ZR62 310 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 ARHGAP36Q6ZRI8 547 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 JAZF1Q86VZ6 243 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 PIH1D2Q8WWB5 315 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 RELTQ969Z4 430 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 GIMAP5Q96F15 307 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 KREMEN1Q96MU8 473 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 EFCAB11Q9BUY7 163 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 COL25A1Q9BXS0 654 aaPredicted RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 BRD7Q9NPI1 651 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 TMEM184CQ9NVA4 438 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 ACTR10Q9NZ32 417 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 TMEM216Q9P0N5 145 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 TMEM184BQ9Y519 407 aaPredicted RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 EME2A4GXA9 379 aaPredicted RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 TPPPO94811 219 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 SLC2A5P22732 501 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 LUMP51884 338 aaPredicted RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 RAB8AP61006 207 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 CRADDP78560 199 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 DEFB110Q30KQ9 67 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 PRAMEF17Q5VTA0 474 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 FAM83HQ6ZRV2 1179 aaPredicted RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 SMIM15Q7Z3B0 74 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 TMC3Q7Z5M5 1100 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 GRAMD2AQ8IUY3 354 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 RNF148Q8N7C7 305 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 ZFAND2BQ8WV99 257 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 FATE1Q969F0 183 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 ZNF700Q9H0M5 742 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 SOX17Q9H6I2 414 aaPredicted RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 PTPRHQ9HD43 1115 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 TAS2R7Q9NYW3 318 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 CALML5Q9NZT1 146 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 RP2O75695 350 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 FADS2O95864 444 aaKnown RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 GP1BBP13224 206 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 OGNP20774 298 aaKnown RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 PRKCHP24723 683 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 AK4P27144 223 aaPredicted RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 CD82P27701 267 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 ASMTP46597 345 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 HSD11B2P80365 405 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 CD83Q01151 205 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 RNASE12Q5GAN4 147 aaKnown RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 ZNF517Q6ZMY9 492 aaPredicted RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 ERI1Q8IV48 349 aaKnown RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 NELL1Q92832 810 aa7.01□□□□□ -1.29
SCN9A-202ENST00000409435 ISG20Q96AZ6 181 aaKnown RBP7.01□□□□□ -1.29
SCN9A-202ENST00000409435 MRGPRX1Q96LB2 322 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms