RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 CCL4P13236 92 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 ITGAXP20702 1163 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 CPN2P22792 545 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 PTPN4P29074 926 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 RPL3P39023 403 aaKnown RBP15.9■□□□□ 0.14
SSB-202ENST00000409333 MNAT1P51948 309 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 MAT1AQ00266 395 aaKnown RBP15.9■□□□□ 0.14
SSB-202ENST00000409333 SYT16Q17RD7 645 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 MPEG1Q2M385 716 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 COQ5Q5HYK3 327 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 KIAA2013Q8IYS2 634 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 KIF2BQ8N4N8 673 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 FAM47BQ8NA70 645 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 EXOSC8Q96B26 276 aaKnown RBP15.9■□□□□ 0.14
SSB-202ENST00000409333 COQ8BQ96D53 544 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 MMABQ96EY8 250 aaPredicted RBP15.9■□□□□ 0.14
SSB-202ENST00000409333 PRPF18Q99633 342 aaKnown RBP15.9■□□□□ 0.14
SSB-202ENST00000409333 CTRCQ99895 268 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 NDC1Q9BTX1 674 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 NPLQ9BXD5 320 aaPredicted RBP15.9■□□□□ 0.14
SSB-202ENST00000409333 LYRM4Q9HD34 91 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 SLAMF8Q9P0V8 285 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 HCN3Q9P1Z3 774 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 PHF11Q9UIL8 331 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 CNOT1A5YKK6 2376 aaKnown RBP15.9■□□□□ 0.14
SSB-202ENST00000409333 SPAARA0A1B0GVQ0 90 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 C1orf226A1L170 272 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 PGRMC2O15173 223 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 SCN2BO60939 215 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 ATXN8OSP0DMR3 200 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 DRD2P14416 443 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 ALAS2P22557 587 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 AVPR1BP47901 424 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 SKP1P63208 163 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 SHC2P98077 582 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 ART3Q13508 389 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 MAPKAPK3Q16644 382 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 PWWP2BQ6NUJ5 590 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 DSELQ8IZU8 1212 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 BHLHE41Q9C0J9 482 aaPredicted RBP15.9■□□□□ 0.14
SSB-202ENST00000409333 LRMDAQ9H2I8 198 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 IL1RL2Q9HB29 575 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 SERHLQ9NQF3 203 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.9■□□□□ 0.14
SSB-202ENST00000409333 MAU2Q9Y6X3 613 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 CEP250Q9BV73 2442 aa15.9■□□□□ 0.14
SSB-202ENST00000409333 CHST10O43529 356 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 TBX19O60806 448 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 CSO75390 466 aaKnown RBP15.89■□□□□ 0.13
SSB-202ENST00000409333 BUD31P41223 144 aaPredicted RBP15.89■□□□□ 0.13
SSB-202ENST00000409333 OR1D4P47884 311 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 RASSF2P50749 326 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 ISXQ2M1V0 245 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 ASRGL1Q7L266 308 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 PPP1R3BQ86XI6 285 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 TMEM126BQ8IUX1 230 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 CLECL1Q8IZS7 167 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 PCYOX1LQ8NBM8 494 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 TMEM52Q8NDY8 209 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.89■□□□□ 0.13
SSB-202ENST00000409333 GTF2H4Q92759 462 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 PMEPA1Q969W9 287 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 MIEF2Q96C03 454 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 SLC39A3Q9BRY0 314 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 BTBD10Q9BSF8 475 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 C1orf21Q9H246 121 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 ATAD3AQ9NVI7 634 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 FAM120CQ9NX05 1096 aaKnown RBP15.89■□□□□ 0.13
SSB-202ENST00000409333 UTS2RQ9UKP6 389 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 CLCA2Q9UQC9 943 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 KNTC1P50748 2209 aa15.89■□□□□ 0.13
SSB-202ENST00000409333 FAM227AF5H4B4 570 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 H0YIG0 161 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 DSCR3O14972 297 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 GYG2O15488 501 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 SCRG1O75711 98 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 MT-CO3P00414 261 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 FTH1P19P0C7X4 201 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 FGF5P12034 268 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 HNRNPFP52597 415 aaKnown RBP15.88■□□□□ 0.13
SSB-202ENST00000409333 ARSFP54793 590 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 RAB38P57729 211 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 SIM1P81133 766 aaPredicted RBP15.88■□□□□ 0.13
SSB-202ENST00000409333 ACTN3Q08043 901 aaPredicted RBP15.88■□□□□ 0.13
SSB-202ENST00000409333 NFYCQ13952 458 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 C6orf10Q5SRN2 563 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 HES3Q5TGS1 186 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 C1orf189Q5VU69 101 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 YOD1Q5VVQ6 348 aaPredicted RBP15.88■□□□□ 0.13
SSB-202ENST00000409333 NIPAL1Q6NVV3 410 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 SLC48A1Q6P1K1 146 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 DNAJC14Q6Y2X3 702 aaPredicted RBP15.88■□□□□ 0.13
SSB-202ENST00000409333 DPP10Q8N608 796 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 SLC38A9Q8NBW4 561 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 KLHL29Q96CT2 875 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 PEX11GQ96HA9 241 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 INPP5KQ9BT40 448 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 RBCK1Q9BYM8 510 aa15.88■□□□□ 0.13
SSB-202ENST00000409333 ACTR5Q9H9F9 607 aaPredicted RBP15.88■□□□□ 0.13
SSB-202ENST00000409333 SLAMF7Q9NQ25 335 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms