RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 A0A1B0GTL3 188 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 ATP6AP2A0A1C7CYW4 349 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 AQP7O14520 342 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 ARHGEF9O43307 516 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 SUSD5O60279 629 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 HCN1O60741 890 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 ATP6AP2O75787 350 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 OR2J2O76002 312 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 RAF1P04049 648 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 SERPINA6P08185 405 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 GLI4P10075 376 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 GCKP35557 465 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 SLC1A2P43004 574 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 RPL21P46778 160 aaKnown RBP7.19□□□□□ -1.26
LSM5-202ENST00000409292 VPS41P49754 854 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 ASCL1P50553 236 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 TERF1P54274 439 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 BTN3A2P78410 334 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 FOXD4Q12950 439 aaPredicted RBP7.19□□□□□ -1.26
LSM5-202ENST00000409292 GPS1Q13098 491 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 EFTUD2Q15029 972 aaKnown RBP eCLIP7.19□□□□□ -1.262e-6■■■■■ 33.5
LSM5-202ENST00000409292 ELAVL1Q15717 326 aaKnown RBP7.19□□□□□ -1.26
LSM5-202ENST00000409292 FLYWCH1Q4VC44 716 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 TOR1AIP1Q5JTV8 583 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 RIPPLY2Q5TAB7 128 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 RAD9BQ6WBX8 426 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 MDGA2Q7Z553 956 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 ZNF227Q86WZ6 799 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 DENND6AQ8IWF6 608 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 KRT78Q8N1N4 520 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 GOLM1Q8NBJ4 401 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 MORN4Q8NDC4 146 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 NFAM1Q8NET5 270 aaPredicted RBP7.19□□□□□ -1.26
LSM5-202ENST00000409292 OR4K1Q8NGD4 311 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 OR14A16Q8NHC5 309 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 GIMAP7Q8NHV1 300 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 SLC22A8Q8TCC7 542 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 UTP15Q8TED0 518 aaKnown RBP7.19□□□□□ -1.26
LSM5-202ENST00000409292 EEF1AKMT1Q8WVE0 214 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 CCT6BQ92526 530 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 NCLNQ969V3 563 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 GAL3ST3Q96A11 431 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 KIAA1191Q96A73 305 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 MBD6Q96DN6 1003 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 LINGO1Q96FE5 620 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 PWWP2AQ96N64 755 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 GPATCH1Q9BRR8 931 aaKnown RBP7.19□□□□□ -1.26
LSM5-202ENST00000409292 AARSD1Q9BTE6 412 aaKnown RBP7.19□□□□□ -1.26
LSM5-202ENST00000409292 CAPS2Q9BXY5 557 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 TTTY12Q9BZ98 90 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 ROGDIQ9GZN7 287 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 ZDHHC11Q9H8X9 412 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 RASSF1Q9NS23 344 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.19□□□□□ -1.26
LSM5-202ENST00000409292 MYOTQ9UBF9 498 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 GUCA1BQ9UMX6 200 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 PLEKHA6Q9Y2H5 1048 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 PCDHGB3Q9Y5G1 929 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 ADGRG4Q8IZF6 3080 aa7.19□□□□□ -1.26
LSM5-202ENST00000409292 ANKHD1Q8IWZ3 2542 aaKnown RBP7.19□□□□□ -1.26
LSM5-202ENST00000409292 PRRC2AP48634 2157 aaKnown RBP7.18□□□□□ -1.26
LSM5-202ENST00000409292 DNAJC13O75165 2243 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.18□□□□□ -1.26
LSM5-202ENST00000409292 IGKV3D-11A0A0A0MRZ8 115 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 A0A0G2JNJ9 132 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 TUBAL3A6NHL2 446 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 ANKDD1BA6NHY2 528 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 A6NNC1 897 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 SYT5O00445 386 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 PROM1O43490 865 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 IGHG3P01860 377 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 FGGP02679 453 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 GNAZP19086 355 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 RAB38P57729 211 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 KCNJ2P63252 427 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 CCZ1BP86790 482 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 CCZ1P86791 482 aaPredicted RBP7.18□□□□□ -1.26
LSM5-202ENST00000409292 LTBQ06643 244 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 SERTAD2Q14140 314 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 HSP90AA5PQ58FG0 334 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 TRIM40Q6P9F5 258 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 FRA10AC1Q70Z53 315 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 TRILQ7L0X0 811 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 MAATS1Q7Z4T9 603 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 TMPRSS11BQ86T26 416 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 CDC20BQ86Y33 519 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 PM20D2Q8IYS1 436 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 DND1Q8IYX4 353 aaKnown RBP7.18□□□□□ -1.26
LSM5-202ENST00000409292 CA13Q8N1Q1 262 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 TMEM251Q8N6I4 163 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 AMER2Q8N7J2 671 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 APCDD1LQ8NCL9 501 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 MCUQ8NE86 351 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 SRFBP1Q8NEF9 429 aaKnown RBP7.18□□□□□ -1.26
LSM5-202ENST00000409292 OR8K3Q8NH51 312 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 OR56A3Q8NH54 315 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 NRGNQ92686 78 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 RNASE6Q93091 150 aaKnown RBP7.18□□□□□ -1.26
LSM5-202ENST00000409292 PYCR2Q96C36 320 aa7.18□□□□□ -1.26
LSM5-202ENST00000409292 FBXL8Q96CD0 374 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms