RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 OR56A3Q8NH54 315 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 FAR2Q96K12 515 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 HIST1H2AHQ96KK5 128 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 SGCZQ96LD1 299 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 HIST1H2AJQ99878 128 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 H2AFJQ9BTM1 129 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 ARL15Q9NXU5 204 aa15.39■□□□□ 0.05
CHMP3-203ENST00000409225 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.39■□□□□ 0.05
CHMP3-203ENST00000409225 PABPN1LA6NDY0 278 aaKnown RBP15.38■□□□□ 0.05
CHMP3-203ENST00000409225 INAFM1C9JVW0 142 aa15.38■□□□□ 0.05
CHMP3-203ENST00000409225 CLDN4O14493 209 aa15.38■□□□□ 0.05
CHMP3-203ENST00000409225 RFPL3SP0C7P2 107 aa15.38■□□□□ 0.05
CHMP3-203ENST00000409225 CEACAM8P31997 349 aaPredicted RBP15.38■□□□□ 0.05
CHMP3-203ENST00000409225 RAB38P57729 211 aa15.38■□□□□ 0.05
CHMP3-203ENST00000409225 PPP2R2BQ00005 443 aa15.38■□□□□ 0.05
CHMP3-203ENST00000409225 CDK16Q00536 496 aa15.38■□□□□ 0.05
CHMP3-203ENST00000409225 ACSF3Q4G176 576 aaPredicted RBP15.38■□□□□ 0.05
CHMP3-203ENST00000409225 POMZP3Q6PJE2 187 aa15.38■□□□□ 0.05
CHMP3-203ENST00000409225 OPN5Q6U736 354 aa15.38■□□□□ 0.05
CHMP3-203ENST00000409225 LIX1Q8N485 282 aa15.38■□□□□ 0.05
CHMP3-203ENST00000409225 NDNQ99608 321 aa15.38■□□□□ 0.05
CHMP3-203ENST00000409225 OR8D2Q9GZM6 311 aa15.38■□□□□ 0.05
CHMP3-203ENST00000409225 ZNF703Q9H7S9 590 aaPredicted RBP15.38■□□□□ 0.05
CHMP3-203ENST00000409225 ZNF629Q9UEG4 869 aaPredicted RBP15.38■□□□□ 0.05
CHMP3-203ENST00000409225 FBN1P35555 2871 aaKnown RBP15.37■□□□□ 0.05
CHMP3-203ENST00000409225 A0A1W2PPR1 153 aa15.37■□□□□ 0.05
CHMP3-203ENST00000409225 HRGP04196 525 aa15.37■□□□□ 0.05
CHMP3-203ENST00000409225 SERPINA6P08185 405 aa15.37■□□□□ 0.05
CHMP3-203ENST00000409225 AGFG1P52594 562 aaKnown RBP15.37■□□□□ 0.05
CHMP3-203ENST00000409225 RNF4P78317 190 aa15.37■□□□□ 0.05
CHMP3-203ENST00000409225 TIAL1Q01085 375 aaKnown RBP eCLIP15.37■□□□□ 0.05
CHMP3-203ENST00000409225 UGT3A1Q6NUS8 523 aa15.37■□□□□ 0.05
CHMP3-203ENST00000409225 PAQR3Q6TCH7 311 aa15.37■□□□□ 0.05
CHMP3-203ENST00000409225 TMPRSS11BQ86T26 416 aa15.37■□□□□ 0.05
CHMP3-203ENST00000409225 MORN4Q8NDC4 146 aa15.37■□□□□ 0.05
CHMP3-203ENST00000409225 NEIL3Q8TAT5 605 aa15.37■□□□□ 0.05
CHMP3-203ENST00000409225 PTPMT1Q8WUK0 201 aaPredicted RBP15.37■□□□□ 0.05
CHMP3-203ENST00000409225 DAZLQ92904 295 aaKnown RBP15.37■□□□□ 0.05
CHMP3-203ENST00000409225 LINGO1Q96FE5 620 aa15.37■□□□□ 0.05
CHMP3-203ENST00000409225 Q96MF0 132 aa15.37■□□□□ 0.05
CHMP3-203ENST00000409225 AIF1LQ9BQI0 150 aa15.37■□□□□ 0.05
CHMP3-203ENST00000409225 EPB41L4BQ9H329 900 aa15.37■□□□□ 0.05
CHMP3-203ENST00000409225 PELI2Q9HAT8 420 aa15.37■□□□□ 0.05
CHMP3-203ENST00000409225 C20orf96Q9NUD7 363 aaPredicted RBP15.37■□□□□ 0.05
CHMP3-203ENST00000409225 ADAM21Q9UKJ8 722 aa15.37■□□□□ 0.05
CHMP3-203ENST00000409225 FBXO5Q9UKT4 447 aa15.37■□□□□ 0.05
CHMP3-203ENST00000409225 MRPS33Q9Y291 106 aaKnown RBP15.37■□□□□ 0.05
CHMP3-203ENST00000409225 PCDHGB3Q9Y5G1 929 aa15.37■□□□□ 0.05
CHMP3-203ENST00000409225 C15orf38-AP3S2A0A0A6YYH1 394 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 ZCWPW2A0A1B0GU75 182 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 EEF1E1-BLOC1S5C9J1V9 151 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 EEF1E1O43324 174 aaKnown RBP15.36■□□□□ 0.05
CHMP3-203ENST00000409225 GUCA1CO95843 209 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 EPPINO95925 133 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 IL2RAP01589 272 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 ZNF136P52737 540 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 STXBP1P61764 594 aaKnown RBP15.36■□□□□ 0.05
CHMP3-203ENST00000409225 KCNJ2P63252 427 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 SIX1Q15475 284 aaPredicted RBP15.36■□□□□ 0.05
CHMP3-203ENST00000409225 TRIP13Q15645 432 aaPredicted RBP15.36■□□□□ 0.05
CHMP3-203ENST00000409225 CCNG2Q16589 344 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 BBS9Q3SYG4 887 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 PRAMEF20Q5VT98 475 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 LACC1Q8IV20 430 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 ZNF595Q8IYB9 648 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 SIMC1Q8NDZ2 872 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 OR5L2Q8NGL0 311 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 OR14A16Q8NHC5 309 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 ZNF592Q92610 1267 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 FBXL8Q96CD0 374 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 NPLQ9BXD5 320 aaPredicted RBP15.36■□□□□ 0.05
CHMP3-203ENST00000409225 TRIM5Q9C035 493 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 ZFP64Q9NPA5 681 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 BOKQ9UMX3 212 aaPredicted RBP15.36■□□□□ 0.05
CHMP3-203ENST00000409225 DYRK1BQ9Y463 629 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 CAPN6Q9Y6Q1 641 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 NCKAP5O14513 1909 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 HIVEP2P31629 2446 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 TLN2Q9Y4G6 2542 aa15.36■□□□□ 0.05
CHMP3-203ENST00000409225 ERI3O43414 337 aaKnown RBP15.35■□□□□ 0.05
CHMP3-203ENST00000409225 SMPD2O60906 423 aa15.35■□□□□ 0.05
CHMP3-203ENST00000409225 GOSR1O95249 250 aa15.35■□□□□ 0.05
CHMP3-203ENST00000409225 TNNI3P19429 210 aa15.35■□□□□ 0.05
CHMP3-203ENST00000409225 TIMP3P35625 211 aa15.35■□□□□ 0.05
CHMP3-203ENST00000409225 KCNJ1P48048 391 aa15.35■□□□□ 0.05
CHMP3-203ENST00000409225 SARNPP82979 210 aaKnown RBP15.35■□□□□ 0.05
CHMP3-203ENST00000409225 SORDQ00796 357 aa15.35■□□□□ 0.05
CHMP3-203ENST00000409225 ASPHQ12797 758 aa15.35■□□□□ 0.05
CHMP3-203ENST00000409225 KIF5AQ12840 1032 aa15.35■□□□□ 0.05
CHMP3-203ENST00000409225 SLC22A10Q63ZE4 541 aa15.35■□□□□ 0.05
CHMP3-203ENST00000409225 ADGRD1Q6QNK2 874 aa15.35■□□□□ 0.05
CHMP3-203ENST00000409225 NXPE4Q6UWF7 544 aa15.35■□□□□ 0.05
CHMP3-203ENST00000409225 CAND1Q86VP6 1230 aaKnown RBP15.35■□□□□ 0.05
CHMP3-203ENST00000409225 OR8K3Q8NH51 312 aa15.35■□□□□ 0.05
CHMP3-203ENST00000409225 SLC2A12Q8TD20 617 aa15.35■□□□□ 0.05
CHMP3-203ENST00000409225 ATL1Q8WXF7 558 aa15.35■□□□□ 0.05
CHMP3-203ENST00000409225 CCT6BQ92526 530 aa15.35■□□□□ 0.05
CHMP3-203ENST00000409225 GAL3ST3Q96A11 431 aa15.35■□□□□ 0.05
CHMP3-203ENST00000409225 JSRP1Q96MG2 331 aaPredicted RBP15.35■□□□□ 0.05
CHMP3-203ENST00000409225 RUNDC3BQ96NL0 473 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms