RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 MFSD4BQ5TF39 518 aa27.63■■■□□ 2.01
USP42-202ENST00000404008 TMEM52Q8NDY8 209 aa27.63■■■□□ 2.01
USP42-202ENST00000404008 FCRL1Q96LA6 429 aa27.63■■■□□ 2.01
USP42-202ENST00000404008 CNTNAP3BQ96NU0 1288 aa27.63■■■□□ 2.01
USP42-202ENST00000404008 EBPLQ9BY08 206 aa27.63■■■□□ 2.01
USP42-202ENST00000404008 CNTNAP3Q9BZ76 1288 aa27.63■■■□□ 2.01
USP42-202ENST00000404008 VN1R1Q9GZP7 353 aa27.63■■■□□ 2.01
USP42-202ENST00000404008 CCDC134Q9H6E4 229 aa27.63■■■□□ 2.01
USP42-202ENST00000404008 C3orf18Q9UK00 162 aa27.63■■■□□ 2.01
USP42-202ENST00000404008 OR2W5A6NFC9 320 aa27.62■■■□□ 2.01
USP42-202ENST00000404008 B4GALT2O60909 372 aa27.62■■■□□ 2.01
USP42-202ENST00000404008 PEX11AO75192 247 aa27.62■■■□□ 2.01
USP42-202ENST00000404008 RECKO95980 971 aa27.62■■■□□ 2.01
USP42-202ENST00000404008 HEXBP07686 556 aa27.62■■■□□ 2.01
USP42-202ENST00000404008 HNRNPFP52597 415 aaKnown RBP27.62■■■□□ 2.01
USP42-202ENST00000404008 RHAGQ02094 409 aa27.62■■■□□ 2.01
USP42-202ENST00000404008 SSPNQ14714 243 aa27.62■■■□□ 2.01
USP42-202ENST00000404008 RFTN2Q52LD8 501 aaPredicted RBP27.62■■■□□ 2.01
USP42-202ENST00000404008 NOXRED1Q6NXP6 359 aa27.62■■■□□ 2.01
USP42-202ENST00000404008 TUBGCP3Q96CW5 907 aa27.62■■■□□ 2.01
USP42-202ENST00000404008 SEMA3GQ9NS98 782 aa27.62■■■□□ 2.01
USP42-202ENST00000404008 TEX10Q9NXF1 929 aaPredicted RBP27.62■■■□□ 2.01
USP42-202ENST00000404008 ZMIZ1Q9ULJ6 1067 aa27.62■■■□□ 2.01
USP42-202ENST00000404008 MRPS33Q9Y291 106 aaKnown RBP27.62■■■□□ 2.01
USP42-202ENST00000404008 TMED5Q9Y3A6 229 aa27.62■■■□□ 2.01
USP42-202ENST00000404008 POLR3HQ9Y535 204 aaPredicted RBP27.62■■■□□ 2.01
USP42-202ENST00000404008 GNG14A0A1W2PPG7 69 aa27.61■■■□□ 2.01
USP42-202ENST00000404008 A0A1W2PR48 441 aa27.61■■■□□ 2.01
USP42-202ENST00000404008 TRPC5OSA6NMA1 111 aa27.61■■■□□ 2.01
USP42-202ENST00000404008 ZNF195O14628 629 aa27.61■■■□□ 2.01
USP42-202ENST00000404008 MYO1DO94832 1006 aa27.61■■■□□ 2.01
USP42-202ENST00000404008 CYC1P08574 325 aa27.61■■■□□ 2.01
USP42-202ENST00000404008 ANXA4P09525 319 aaPredicted RBP27.61■■■□□ 2.01
USP42-202ENST00000404008 BUD31P41223 144 aaPredicted RBP27.61■■■□□ 2.01
USP42-202ENST00000404008 EMP2P54851 167 aa27.61■■■□□ 2.01
USP42-202ENST00000404008 TRA2BP62995 288 aaKnown RBP27.61■■■□□ 2.01
USP42-202ENST00000404008 RPL38P63173 70 aaKnown RBP27.61■■■□□ 2.01
USP42-202ENST00000404008 C6orf136Q5SQH8 315 aa27.61■■■□□ 2.01
USP42-202ENST00000404008 C18orf63Q68DL7 685 aa27.61■■■□□ 2.01
USP42-202ENST00000404008 CCDC81Q6ZN84 652 aa27.61■■■□□ 2.01
USP42-202ENST00000404008 MAVSQ7Z434 540 aa27.61■■■□□ 2.01
USP42-202ENST00000404008 ZNF595Q8IYB9 648 aa27.61■■■□□ 2.01
USP42-202ENST00000404008 FAM53CQ9NYF3 392 aa27.61■■■□□ 2.01
USP42-202ENST00000404008 ZNF891A8MT65 544 aaPredicted RBP27.6■■■□□ 2.01
USP42-202ENST00000404008 EDF1O60869 148 aaKnown RBP27.6■■■□□ 2.01
USP42-202ENST00000404008 PRR35P0CG20 571 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 UGT8Q16880 541 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 CRTC2Q53ET0 693 aaPredicted RBP27.6■■■□□ 2.01
USP42-202ENST00000404008 QSOX2Q6ZRP7 698 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 ADAMTS17Q8TE56 1095 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 TM4SF18Q96CE8 201 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 AKTIPQ9H8T0 292 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 DLGAP4Q9Y2H0 992 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 USH1CQ9Y6N9 552 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 BLACEA4D250 179 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 SDHDO14521 159 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 PRMT3O60678 531 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 GUCY1B2O75343 617 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 AIFM1O95831 613 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 IGHEP01854 428 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 NR2F6P10588 404 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 MMP11P24347 488 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 TLX1P31314 330 aaPredicted RBP27.6■■■□□ 2.01
USP42-202ENST00000404008 UCNP55089 124 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 BTG2P78543 158 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 MC1RQ01726 317 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 NDUFAF5Q5TEU4 345 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 VWA5B1Q5TIE3 1220 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 RPF2Q9H7B2 306 aaKnown RBP27.6■■■□□ 2.01
USP42-202ENST00000404008 PRDM9Q9NQV7 894 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 MMACHCQ9Y4U1 282 aa27.6■■■□□ 2.01
USP42-202ENST00000404008 LOC400499M0QZD8 3231 aa27.59■■■□□ 2.01
USP42-202ENST00000404008 DSPP15924 2871 aaKnown RBP27.59■■■□□ 2.01
USP42-202ENST00000404008 CLDN4O14493 209 aa27.59■■■□□ 2.01
USP42-202ENST00000404008 NKX2-8O15522 239 aa27.59■■■□□ 2.01
USP42-202ENST00000404008 VPS4BO75351 444 aa27.59■■■□□ 2.01
USP42-202ENST00000404008 PRKRAO75569 313 aaKnown RBP27.59■■■□□ 2.01
USP42-202ENST00000404008 OTX2P32243 289 aa27.59■■■□□ 2.01
USP42-202ENST00000404008 GSTM5P46439 218 aa27.59■■■□□ 2.01
USP42-202ENST00000404008 MAP1BP46821 2468 aaKnown RBP27.59■■■□□ 2.01
USP42-202ENST00000404008 HSD17B7P56937 341 aa27.59■■■□□ 2.01
USP42-202ENST00000404008 TMPRSS3P57727 454 aa27.59■■■□□ 2.01
USP42-202ENST00000404008 ZNF763Q0D2J5 394 aa27.59■■■□□ 2.01
USP42-202ENST00000404008 PPP1R32Q7Z5V6 425 aa27.59■■■□□ 2.01
USP42-202ENST00000404008 SCUBE1Q8IWY4 988 aa27.59■■■□□ 2.01
USP42-202ENST00000404008 ZSCAN1Q8NBB4 408 aa27.59■■■□□ 2.01
USP42-202ENST00000404008 PLPP5Q8NEB5 264 aa27.59■■■□□ 2.01
USP42-202ENST00000404008 C16orf78Q8WTQ4 265 aa27.59■■■□□ 2.01
USP42-202ENST00000404008 PCSK5Q92824 1860 aa27.59■■■□□ 2.01
USP42-202ENST00000404008 PRTFDC1Q9NRG1 225 aa27.59■■■□□ 2.01
USP42-202ENST00000404008 ALOX12BO75342 701 aa27.58■■■□□ 2.01
USP42-202ENST00000404008 FURINP09958 794 aa27.58■■■□□ 2.01
USP42-202ENST00000404008 ACPPP15309 386 aa27.58■■■□□ 2.01
USP42-202ENST00000404008 ALOX15P16050 662 aaPredicted RBP27.58■■■□□ 2.01
USP42-202ENST00000404008 MAOAP21397 527 aa27.58■■■□□ 2.01
USP42-202ENST00000404008 TAS2R50P59544 299 aa27.58■■■□□ 2.01
USP42-202ENST00000404008 SMU1Q2TAY7 513 aa27.58■■■□□ 2.01
USP42-202ENST00000404008 TMEM205Q6UW68 189 aa27.58■■■□□ 2.01
USP42-202ENST00000404008 LARP4Q71RC2 724 aaKnown RBP eCLIP27.58■■■□□ 2.01
USP42-202ENST00000404008 RAB43Q86YS6 212 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms