RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 LIMK2P53671 638 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 ATP12AP54707 1039 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 PEX3P56589 373 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 STARD6P59095 220 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 KARSQ15046 597 aaKnown RBP3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 TMEM30BQ3MIR4 351 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 CMPK2Q5EBM0 449 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 CD164L2Q6UWJ8 174 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 MFSD7Q6UXD7 560 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 ZNF730Q6ZMV8 503 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 BNIPLQ7Z465 357 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 ZER1Q7Z7L7 766 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 ADGRD2Q7Z7M1 963 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 ZNF444Q8N0Y2 327 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 OR5T2Q8NGG2 359 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 OR5M9Q8NGP3 310 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 GANCQ8TET4 914 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 LIPHQ8WWY8 451 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 SLCO2A1Q92959 643 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 MRPL24Q96A35 216 aaKnown RBP3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 PKP2Q99959 881 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 PITPNM3Q9BZ71 974 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 SIRPDQ9H106 197 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 UBE2TQ9NPD8 197 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 B3GAT2Q9NPZ5 323 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 MED17Q9NVC6 651 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 TECRQ9NZ01 308 aaKnown RBP3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 NARFQ9UHQ1 456 aa3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 ISY1Q9ULR0 285 aaKnown RBP3.3□□□□□ -1.88
HMGB1P17-201ENST00000403495 KIF7Q2M1P5 1343 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 RNF123Q5XPI4 1314 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 TRBV2A0A0J9YWF9 115 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 CFAP73A6NFT4 308 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 C19orf81C9J6K1 198 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 ADAM12O43184 909 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 PRDM1O75626 825 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 ANXA9O76027 345 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 TXNDC12O95881 172 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 IGLV1-44P01699 117 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 MMP10P09238 476 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 CD1DP15813 335 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 HOXB6P17509 224 aaKnown RBP3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 GLRA1P23415 457 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 MAPK3P27361 379 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 MARCKSP29966 332 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 STIP1P31948 543 aaKnown RBP3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 CD86P42081 329 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 CAMLGP49069 296 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 TKTL1P51854 596 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 GABPAQ06546 454 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 GPAT3Q53EU6 434 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 LDLRAP1Q5SW96 308 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 BSPRYQ5W0U4 402 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 DLEU7Q6UYE1 221 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 KIF6Q6ZMV9 814 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 CYP4V2Q6ZWL3 525 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 KCNMB4Q86W47 210 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 PARP8Q8N3A8 854 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 SLCO4A1Q96BD0 722 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 EEF2KMTQ96G04 330 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 TAAR6Q96RI8 345 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 USP28Q96RU2 1077 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 S1PR3Q99500 378 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 OVOL2Q9BRP0 275 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 KRT23Q9C075 422 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 TMEM245Q9H330 911 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 KCNK13Q9HB14 408 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 MIS18AQ9NYP9 233 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 KLK11Q9UBX7 282 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 DNPEPQ9ULA0 475 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 DIMT1Q9UNQ2 313 aaKnown RBP3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 PIN4Q9Y237 131 aaKnown RBP3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 ATG4BQ9Y4P1 393 aa3.29□□□□□ -1.88
HMGB1P17-201ENST00000403495 CNTNAP2Q9UHC6 1331 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 MEX3AA1L020 520 aaKnown RBP3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 OR5H15A6NDH6 313 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 NKX6-3A6NJ46 265 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 TCP10L2B9ZVM9 353 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 SLCO1B7G3V0H7 640 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 EDIL3O43854 480 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 PRPSAP2O60256 369 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 SOCS5O75159 536 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 MT-ATP6P00846 226 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 CCDC192P0DO97 292 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 ZNF18P17022 549 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 CYP3A5P20815 502 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 MTIF2P46199 727 aaKnown RBP3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 FHITP49789 147 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 ATXN3P54252 364 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 RPL27P61353 136 aaKnown RBP3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 RPS27AP62979 156 aaKnown RBP3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 RBBP4Q09028 425 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 ITPK1Q13572 414 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 NECTIN1Q15223 517 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 OR1C1Q15619 314 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 CARTPTQ16568 116 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 WLSQ5T9L3 541 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 LIPJQ5W064 366 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 TRIM65Q6PJ69 517 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 FRRS1Q6ZNA5 592 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms