RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 KRT6BP04259 564 aa18■□□□□ 0.47
RTN4-207ENST00000402434 ITGAMP11215 1152 aa18■□□□□ 0.47
RTN4-207ENST00000402434 CREB1P16220 341 aa18■□□□□ 0.47
RTN4-207ENST00000402434 SOX11P35716 441 aa18■□□□□ 0.47
RTN4-207ENST00000402434 KRT6CP48668 564 aa18■□□□□ 0.47
RTN4-207ENST00000402434 ZNF33BQ06732 778 aa18■□□□□ 0.47
RTN4-207ENST00000402434 SLC13A2Q13183 592 aa18■□□□□ 0.47
RTN4-207ENST00000402434 BTBD16Q32M84 506 aa18■□□□□ 0.47
RTN4-207ENST00000402434 TNFAIP8L3Q5GJ75 292 aa18■□□□□ 0.47
RTN4-207ENST00000402434 LIPMQ5VYY2 423 aa18■□□□□ 0.47
RTN4-207ENST00000402434 ISLR2Q6UXK2 745 aa18■□□□□ 0.47
RTN4-207ENST00000402434 ATG14Q6ZNE5 492 aa18■□□□□ 0.47
RTN4-207ENST00000402434 GPR180Q86V85 440 aa18■□□□□ 0.47
RTN4-207ENST00000402434 METTL6Q8TCB7 284 aa18■□□□□ 0.47
RTN4-207ENST00000402434 BRIX1Q8TDN6 353 aaKnown RBP18■□□□□ 0.47
RTN4-207ENST00000402434 TCP10LQ8TDR4 215 aa18■□□□□ 0.47
RTN4-207ENST00000402434 AGAP11Q8TF27 550 aa18■□□□□ 0.47
RTN4-207ENST00000402434 ZIM3Q96PE6 472 aa18■□□□□ 0.47
RTN4-207ENST00000402434 MMP25Q9NPA2 562 aa18■□□□□ 0.47
RTN4-207ENST00000402434 FBXW2Q9UKT8 454 aa18■□□□□ 0.47
RTN4-207ENST00000402434 ASB4Q9Y574 426 aa18■□□□□ 0.47
RTN4-207ENST00000402434 SYNDIG1LA6NDD5 238 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 RGS16O15492 202 aaPredicted RBP17.99■□□□□ 0.47
RTN4-207ENST00000402434 TYROBPO43914 113 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 ULK1O75385 1050 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 SPAG7O75391 227 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 ERLIN1O75477 346 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 HSD3B1P14060 373 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 CPN2P22792 545 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 HSD3B2P26439 372 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 CD97P48960 835 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 SLC26A5P58743 744 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 MFAP5Q13361 173 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 TERF2Q15554 542 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 NADK2Q4G0N4 442 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 CFAP157Q5JU67 520 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 TCHHL1Q5QJ38 904 aaPredicted RBP17.99■□□□□ 0.47
RTN4-207ENST00000402434 BEND6Q5SZJ8 279 aaPredicted RBP17.99■□□□□ 0.47
RTN4-207ENST00000402434 H3F3CQ6NXT2 135 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 CROCCP2Q86T23 111 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 NUDT13Q86X67 352 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 C10orf107Q8IVU9 208 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 NFAM1Q8NET5 270 aaPredicted RBP17.99■□□□□ 0.47
RTN4-207ENST00000402434 FAM111AQ96PZ2 611 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 MRPL1Q9BYD6 325 aaKnown RBP17.99■□□□□ 0.47
RTN4-207ENST00000402434 MID1IP1Q9NPA3 183 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 AHSPQ9NZD4 102 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 SLC17A7Q9P2U7 560 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 PHF11Q9UIL8 331 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 ADAM29Q9UKF5 820 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 ATG4BQ9Y4P1 393 aa17.99■□□□□ 0.47
RTN4-207ENST00000402434 PROM1O43490 865 aa17.98■□□□□ 0.47
RTN4-207ENST00000402434 TMPRSS11DO60235 418 aa17.98■□□□□ 0.47
RTN4-207ENST00000402434 TRIM13O60858 407 aa17.98■□□□□ 0.47
RTN4-207ENST00000402434 FAM58BPP0C7Q3 252 aa17.98■□□□□ 0.47
RTN4-207ENST00000402434 HNRNPH2P55795 449 aaKnown RBP17.98■□□□□ 0.47
RTN4-207ENST00000402434 CEP85LQ5SZL2 805 aa17.98■□□□□ 0.47
RTN4-207ENST00000402434 FAM219BQ5XKK7 198 aa17.98■□□□□ 0.47
RTN4-207ENST00000402434 LRIG3Q6UXM1 1119 aa17.98■□□□□ 0.47
RTN4-207ENST00000402434 PRICKLE2Q7Z3G6 844 aa17.98■□□□□ 0.47
RTN4-207ENST00000402434 METTL4Q8N3J2 472 aa17.98■□□□□ 0.47
RTN4-207ENST00000402434 ZADH2Q8N4Q0 377 aa17.98■□□□□ 0.47
RTN4-207ENST00000402434 SIRT6Q8N6T7 355 aa17.98■□□□□ 0.47
RTN4-207ENST00000402434 NMRK1Q9NWW6 199 aa17.98■□□□□ 0.47
RTN4-207ENST00000402434 LYARQ9NX58 379 aaKnown RBP17.98■□□□□ 0.47
RTN4-207ENST00000402434 PTGFRNQ9P2B2 879 aa17.98■□□□□ 0.47
RTN4-207ENST00000402434 PPIEQ9UNP9 301 aaKnown RBP17.98■□□□□ 0.47
RTN4-207ENST00000402434 SLC12A4Q9UP95 1085 aa17.98■□□□□ 0.47
RTN4-207ENST00000402434 NBASA2RRP1 2371 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 SAGE2PA6NJ88 616 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 SLC28A2O43868 658 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 HMOX2P30519 316 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 TBL3Q12788 808 aaKnown RBP17.97■□□□□ 0.47
RTN4-207ENST00000402434 CSTF3Q12996 717 aaKnown RBP17.97■□□□□ 0.47
RTN4-207ENST00000402434 SLC6A19Q695T7 634 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 CYP20A1Q6UW02 462 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 Q6ZS92 163 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 PAGE2Q7Z2X7 111 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 GBP7Q8N8V2 638 aaPredicted RBP17.97■□□□□ 0.47
RTN4-207ENST00000402434 C7orf57Q8NEG2 295 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 ELP5Q8TE02 316 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 TANKQ92844 425 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 PNPLA2Q96AD5 504 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 ANKRD9Q96BM1 317 aaPredicted RBP17.97■□□□□ 0.47
RTN4-207ENST00000402434 PGM2Q96G03 612 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 KCNA7Q96RP8 456 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 HBEGFQ99075 208 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 GATA5Q9BWX5 397 aaPredicted RBP17.97■□□□□ 0.47
RTN4-207ENST00000402434 EPS8L2Q9H6S3 715 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 RPF2Q9H7B2 306 aaKnown RBP17.97■□□□□ 0.47
RTN4-207ENST00000402434 VPS29Q9UBQ0 182 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 VTI1BQ9UEU0 232 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 B3GNT3Q9Y2A9 372 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 TIMM22Q9Y584 194 aa17.97■□□□□ 0.47
RTN4-207ENST00000402434 HELZ2Q9BYK8 2649 aaKnown RBP17.97■□□□□ 0.47
RTN4-207ENST00000402434 A0A1W2PR48 441 aa17.96■□□□□ 0.47
RTN4-207ENST00000402434 SERTM1A2A2V5 107 aa17.96■□□□□ 0.47
RTN4-207ENST00000402434 LDB3O75112 727 aa17.96■□□□□ 0.47
RTN4-207ENST00000402434 SORBS2O94875 1100 aaKnown RBP17.96■□□□□ 0.47
RTN4-207ENST00000402434 PLA2G2AP14555 144 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms