RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 IPPKQ9H8X2 491 aa14.79□□□□□ -0.04
ATG4B-203ENST00000400772 ACTR8Q9H981 624 aa14.79□□□□□ -0.04
ATG4B-203ENST00000400772 DMRT3Q9NQL9 472 aa14.79□□□□□ -0.04
ATG4B-203ENST00000400772 XPR1Q9UBH6 696 aa14.79□□□□□ -0.04
ATG4B-203ENST00000400772 VTI1BQ9UEU0 232 aa14.79□□□□□ -0.04
ATG4B-203ENST00000400772 RNF11Q9Y3C5 154 aa14.79□□□□□ -0.04
ATG4B-203ENST00000400772 TNPO3Q9Y5L0 923 aaKnown RBP14.79□□□□□ -0.04
ATG4B-203ENST00000400772 TRBV11-1A0A0K0K1C0 115 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 A1L4Q6 167 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 TMEM200CA6NKL6 621 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 PLPP1O14494 284 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 UGDHO60701 494 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 LDB3O75112 727 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 KRT38O76015 456 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 CLDN1O95832 211 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 SP1P08047 785 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 SBK3P0C264 359 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 COL6A2P12110 1019 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 CD46P15529 392 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 EEF1DP29692 281 aaKnown RBP14.78□□□□□ -0.04
ATG4B-203ENST00000400772 NEK2P51955 445 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 RPS13P62277 151 aaKnown RBP14.78□□□□□ -0.04
ATG4B-203ENST00000400772 SLAMF1Q13291 335 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 RCN2Q14257 317 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 CPSF6Q16630 551 aaKnown RBP eCLIP14.78□□□□□ -0.04
ATG4B-203ENST00000400772 SLC25A25Q6KCM7 469 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 GALNTL5Q7Z4T8 443 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 MYLK4Q86YV6 388 aaPredicted RBP14.78□□□□□ -0.04
ATG4B-203ENST00000400772 OR52B6Q8NGF0 335 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 WDR20Q8TBZ3 569 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 THAP3Q8WTV1 239 aaPredicted RBP14.78□□□□□ -0.04
ATG4B-203ENST00000400772 RGMAQ96B86 450 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 VMP1Q96GC9 406 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 CDK15Q96Q40 435 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 NOL11Q9H8H0 719 aaKnown RBP14.78□□□□□ -0.04
ATG4B-203ENST00000400772 ZBTB26Q9HCK0 441 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 ADAP2Q9NPF8 381 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 FBXW2Q9UKT8 454 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 PCDHGA11Q9Y5H2 935 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 IKBKGQ9Y6K9 419 aa14.78□□□□□ -0.04
ATG4B-203ENST00000400772 SPTAN1Q13813 2472 aaKnown RBP14.77□□□□□ -0.04
ATG4B-203ENST00000400772 STX16-NPEPL1H3BU86 382 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 STX16O14662 325 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 SLC25A12O75746 678 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 UNC5CO95185 931 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 ETHE1O95571 254 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 ABHD2P08910 425 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 FAM153BP0C7A2 387 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 CPN2P22792 545 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 CNTFP26441 200 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 SSR2P43308 183 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 PIK3CGP48736 1102 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 CYB561P49447 251 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 HLCSP50747 726 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 ID2Q02363 134 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 STX4Q12846 297 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 ZRSR2Q15696 482 aaKnown RBP14.77□□□□□ -0.05
ATG4B-203ENST00000400772 ELAVL1Q15717 326 aaKnown RBP14.77□□□□□ -0.05
ATG4B-203ENST00000400772 FAM153CQ494X1 144 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 GFRALQ6UXV0 394 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 C16orf47Q6ZP98 133 aaPredicted RBP14.77□□□□□ -0.05
ATG4B-203ENST00000400772 TAOK1Q7L7X3 1001 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.77□□□□□ -0.05
ATG4B-203ENST00000400772 IFT20Q8IY31 132 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 ZCCHC7Q8N3Z6 543 aaKnown RBP14.77□□□□□ -0.05
ATG4B-203ENST00000400772 HORMAD2Q8N7B1 307 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 ZNF321PQ8N8H1 164 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 LRRN4CLQ8ND94 238 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 SCYL1Q96KG9 808 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 NSUN5Q96P11 429 aaKnown RBP14.77□□□□□ -0.05
ATG4B-203ENST00000400772 TXLNGYQ9BZA5 131 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 LIN28AQ9H9Z2 209 aaKnown RBP14.77□□□□□ -0.05
ATG4B-203ENST00000400772 PRM3Q9NNZ6 103 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 PSD3Q9NYI0 1048 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 PCTPQ9UKL6 214 aa14.77□□□□□ -0.05
ATG4B-203ENST00000400772 SPTBN1Q01082 2364 aaKnown RBP14.77□□□□□ -0.05
ATG4B-203ENST00000400772 FCHO1O14526 889 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 RIPK2O43353 540 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 NME2P1O60361 137 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 ITGA10O75578 1167 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 IFNA16P05015 189 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 SNRPAP09012 282 aaKnown RBP14.76□□□□□ -0.05
ATG4B-203ENST00000400772 RHOXF2BP0C7M4 288 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 NME2P22392 152 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 PTX3P26022 381 aaPredicted RBP14.76□□□□□ -0.05
ATG4B-203ENST00000400772 BSGP35613 385 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 ARFIP1P53367 373 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 SERTAD2Q14140 314 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 MAPKAPK3Q16644 382 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 TSNAXIP1Q2TAA8 658 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 C1QL3Q5VWW1 255 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 C18orf63Q68DL7 685 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 ADGRD1Q6QNK2 874 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 TIFABQ6ZNK6 161 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 RPS27LQ71UM5 84 aaKnown RBP14.76□□□□□ -0.05
ATG4B-203ENST00000400772 TRMT10CQ7L0Y3 403 aaKnown RBP14.76□□□□□ -0.05
ATG4B-203ENST00000400772 OR4N5Q8IXE1 308 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 TMEM132CQ8N3T6 1108 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 TMEM178AQ8NBL3 297 aa14.76□□□□□ -0.05
ATG4B-203ENST00000400772 RELTQ969Z4 430 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms