RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 KLF8O95600 359 aaPredicted RBP17.79■□□□□ 0.44
USP25-204ENST00000400183 TESCQ96BS2 214 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 SLC45A3Q96JT2 553 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 SLC2A11Q9BYW1 496 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 SMURF1Q9HCE7 757 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 H3BSH0 61 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 ZNF623O75123 536 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 OR12D1P0DN82 309 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 CD9P21926 228 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 CCNOP22674 350 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 KCNAB2Q13303 367 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 PMS2P3Q13401 168 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 C1orf94Q6P1W5 598 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 KCTD18Q6PI47 426 aaPredicted RBP17.79■□□□□ 0.44
USP25-204ENST00000400183 NSUN5Q96P11 429 aaKnown RBP17.79■□□□□ 0.44
USP25-204ENST00000400183 DOHHQ9BU89 302 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 TP53I11O14683 189 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 ENDOUP21128 410 aaKnown RBP17.79■□□□□ 0.44
USP25-204ENST00000400183 S1PR1P21453 382 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 HERV-K104P61576 105 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 DEFA5Q01523 94 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 TMPRSS9Q7Z410 1059 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 DEFB119Q8N690 84 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 IRF2BPLQ9H1B7 796 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 LTBP3Q9NS15 1303 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 S1PR4O95977 384 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 HNRNPA1P09651 372 aaKnown RBP eCLIP17.79■□□□□ 0.44
USP25-204ENST00000400183 HTR1EP28566 365 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 PER3P56645 1201 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 MVB12BQ9H7P6 319 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 DUOX1Q9NRD9 1551 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 HCN2Q9UL51 889 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 LOC100509620A0A075B734 347 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 C13orf42A0A1B0GVH6 325 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 E7ESA3 106 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 AXIN1O15169 862 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 HCRTR2O43614 444 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 CSTAP01040 98 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 BCKDHAP12694 445 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 HOXD8P13378 290 aaPredicted RBP17.79■□□□□ 0.44
USP25-204ENST00000400183 GLDCP23378 1020 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 DCKP27707 260 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 PITX1P78337 314 aaPredicted RBP17.79■□□□□ 0.44
USP25-204ENST00000400183 GRK1Q15835 563 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 GLT8D1Q68CQ7 371 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 GPR62Q9BZJ7 368 aa17.79■□□□□ 0.44
USP25-204ENST00000400183 PRLP01236 227 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 ZNF806P0C7X5 589 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 GABRA3P34903 492 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 EIF2S3P41091 472 aaKnown RBP17.78■□□□□ 0.44
USP25-204ENST00000400183 E2F1Q01094 437 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 ST3GAL4Q11206 333 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 LRIF1Q5T3J3 769 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 TMEM225Q6GV28 225 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 KIAA1143Q96AT1 154 aaPredicted RBP17.78■□□□□ 0.44
USP25-204ENST00000400183 HSPA12BQ96MM6 686 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 RBCK1Q9BYM8 510 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 PLCL2Q9UPR0 1127 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 SH2B3Q9UQQ2 575 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 PCDHB3Q9Y5E6 796 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 TRIM64CA6NLI5 447 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 EMC8O43402 210 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 IL33O95760 270 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 JUPP14923 745 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 PLP2Q04941 152 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 ELAVL3Q14576 367 aaKnown RBP17.78■□□□□ 0.44
USP25-204ENST00000400183 RPL13AP3Q6NVV1 102 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 NAXEQ8NCW5 288 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 OR2T33Q8NG76 320 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 ZNF420Q8TAQ5 688 aaPredicted RBP17.78■□□□□ 0.44
USP25-204ENST00000400183 GLS2Q9UI32 602 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 A0A1W2PP55 124 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 SLC35F4A4IF30 521 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 LRRN3E7EW58 273 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 SLC33A1O00400 549 aaPredicted RBP17.78■□□□□ 0.44
USP25-204ENST00000400183 CLIC3O95833 236 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 JMJD7P0C870 316 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 CAPZA1P52907 286 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 UNC50Q53HI1 259 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 NUP43Q8NFH3 380 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 SAMD11Q96NU1 681 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 PIP5K1AQ99755 562 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 LRRN3Q9H3W5 708 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 FARSAQ9Y285 508 aaKnown RBP17.78■□□□□ 0.44
USP25-204ENST00000400183 CELP19835 753 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 CBLP22681 906 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 SOX4Q06945 474 aaPredicted RBP17.78■□□□□ 0.44
USP25-204ENST00000400183 LRRC69Q6ZNQ3 347 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 ZNF283Q8N7M2 679 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 MUS81Q96NY9 551 aa17.78■□□□□ 0.44
USP25-204ENST00000400183 AFDNP55196 1824 aaKnown RBP17.77■□□□□ 0.44
USP25-204ENST00000400183 A0A1B0GVC2 190 aa17.77■□□□□ 0.44
USP25-204ENST00000400183 ZNF840PA6NDX5 716 aa17.77■□□□□ 0.44
USP25-204ENST00000400183 MAFKO60675 156 aa17.77■□□□□ 0.44
USP25-204ENST00000400183 BEST1O76090 585 aa17.77■□□□□ 0.44
USP25-204ENST00000400183 TFPTP0C1Z6 253 aa17.77■□□□□ 0.44
USP25-204ENST00000400183 GRB7Q14451 532 aa17.77■□□□□ 0.44
USP25-204ENST00000400183 EIF4HQ15056 248 aaKnown RBP17.77■□□□□ 0.44
USP25-204ENST00000400183 ZNF367Q7RTV3 350 aa17.77■□□□□ 0.44
USP25-204ENST00000400183 GPAT4Q86UL3 456 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms