RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 LIN52Q52LA3 116 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 GPRIN1Q7Z2K8 1008 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 NPAS3Q8IXF0 933 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 IQCKQ8N0W5 287 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 ZNF641Q96N77 438 aaPredicted RBP13.23□□□□□ -0.29
VAPA-202ENST00000400000 FOXN4Q96NZ1 517 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 TMEM121BQ9BXQ6 578 aaPredicted RBP13.23□□□□□ -0.29
VAPA-202ENST00000400000 MTG2Q9H4K7 406 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 OR2B3O76000 313 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 TNFRSF1BP20333 461 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 PSMA6P60900 246 aaKnown RBP13.23□□□□□ -0.29
VAPA-202ENST00000400000 RPS21P63220 83 aaKnown RBP13.23□□□□□ -0.29
VAPA-202ENST00000400000 NUMA1Q14980 2115 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 FAM76BQ5HYJ3 339 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 IGDCC3Q8IVU1 814 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 RHBDD1Q8TEB9 315 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 HSPA12BQ96MM6 686 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 TRIM36Q9NQ86 728 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 TAS2R9Q9NYW1 312 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 CITO14578 2027 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 SAGE2PA6NJ88 616 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 GGT2P36268 569 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 TGFBIQ15582 683 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 DPY19L3Q6ZPD9 716 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 ERN2Q76MJ5 926 aaKnown RBP13.23□□□□□ -0.29
VAPA-202ENST00000400000 CNIH3Q8TBE1 160 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 IGSF8Q969P0 613 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 MACROD1Q9BQ69 325 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 PITX1P78337 314 aaPredicted RBP13.23□□□□□ -0.29
VAPA-202ENST00000400000 NFE2L1Q14494 772 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 CHRFAM7AQ494W8 412 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 CFAP77Q6ZQR2 320 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 CILP2Q8IUL8 1156 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 PITX2Q99697 317 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 ASB6Q9NWX5 421 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 POFUT2Q9Y2G5 429 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 IRF2P14316 349 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 AFF1P51825 1210 aaKnown RBP13.23□□□□□ -0.29
VAPA-202ENST00000400000 ADAM15Q13444 863 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 LIPKQ5VXJ0 399 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 KLHDC10Q6PID8 442 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 LHFPL3Q86UP9 236 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 ZC3HC1Q86WB0 502 aaKnown RBP13.23□□□□□ -0.29
VAPA-202ENST00000400000 RPLP0P6Q8NHW5 317 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 IGSF21Q96ID5 467 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 LRCH3Q96II8 777 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 RAB36O95755 333 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 HMGN1P05114 100 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 PVALBP20472 110 aaPredicted RBP13.22□□□□□ -0.29
VAPA-202ENST00000400000 GLP1RP43220 463 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 NR4A2P43354 598 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 RPA4Q13156 261 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 CCDC107Q8WV48 283 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 DIO2Q92813 273 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 BIRC7Q96CA5 298 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 PGAM5Q96HS1 289 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 CFL2Q9Y281 166 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 PFKLP17858 780 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 MFSD5Q6N075 450 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 SGCZQ96LD1 299 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 CAMK1GQ96NX5 476 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 RDH8Q9NYR8 311 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 ZNF850A8MQ14 1090 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 MAFKO60675 156 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 OAS1P00973 400 aaKnown RBP13.22□□□□□ -0.29
VAPA-202ENST00000400000 GTF2F2P13984 249 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 PHC1P78364 1004 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 AMIGO3Q86WK7 504 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 FAM217AQ8IXS0 508 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 SMOC2Q9H3U7 446 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 NKX1-2Q9UD57 310 aaPredicted RBP13.22□□□□□ -0.29
VAPA-202ENST00000400000 CMAHPQ9Y471 501 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 CD9P21926 228 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 PRDX6P30041 224 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 GSK3BP49841 420 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 NIPAL4Q0D2K0 466 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 DCUN1D3Q8IWE4 304 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 ZNF461Q8TAF7 563 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 SPRYD4Q8WW59 207 aaPredicted RBP13.22□□□□□ -0.29
VAPA-202ENST00000400000 RBP7Q96R05 134 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 HCFC1R1Q9NWW0 138 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 H3BSA7 217 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 CCRL2O00421 344 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 TOXO94900 526 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 IL1RNP18510 177 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 AAK1Q2M2I8 961 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 ZNF805Q5CZA5 627 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 ZNF662Q6ZS27 426 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 KIF18BQ86Y91 864 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 TMEM139Q8IV31 216 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 SLC22A4Q9H015 551 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 METTL21EPA6NDL7 271 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 H3BML4 177 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 M0R129 80 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 ATE1O95260 518 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 EPHA1P21709 976 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 RNF111Q6ZNA4 994 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 ASPGQ86U10 573 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 ZNF709Q8N972 641 aa13.22□□□□□ -0.29
VAPA-202ENST00000400000 ATOH1Q92858 354 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms