RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 RETP07949 1114 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 DRD2P14416 443 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 HHEXQ03014 270 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 FAM92BQ6ZTR7 304 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 MTERF3Q96E29 417 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 DPYSL5Q9BPU6 564 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 ZNF225Q9UK10 706 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 PPIL1Q9Y3C6 166 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 HNRNPCP07910 306 aaKnown RBP eCLIP13.39□□□□□ -0.27
SCAF4-202ENST00000399804 GNSP15586 552 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 RPS15AP62244 130 aaKnown RBP13.39□□□□□ -0.27
SCAF4-202ENST00000399804 DPTQ07507 201 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 DCTN2Q13561 401 aaKnown RBP13.39□□□□□ -0.27
SCAF4-202ENST00000399804 TRIM16LQ309B1 348 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 HS3ST5Q8IZT8 346 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 AQP11Q8NBQ7 271 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 LGR4Q9BXB1 951 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 TMEM168Q9H0V1 697 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 LYARQ9NX58 379 aaKnown RBP13.39□□□□□ -0.27
SCAF4-202ENST00000399804 BTNL2Q9UIR0 455 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 KNTC1P50748 2209 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 A8MUA0 341 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 PRAMEF26H0Y7S4 382 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 CDC123O75794 336 aaPredicted RBP13.39□□□□□ -0.27
SCAF4-202ENST00000399804 PTGER1P34995 402 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 SLC6A12P48065 614 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 OLR1P78380 273 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 RPE65Q16518 533 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 CRB2Q5IJ48 1285 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 TMEM107Q6UX40 140 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 IKBIPQ70UQ0 350 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 RNF44Q7L0R7 432 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 RSPRY1Q96DX4 576 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 KCNK12Q9HB15 430 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 ANKMY1Q9P2S6 941 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 CD300AQ9UGN4 299 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 WBP11Q9Y2W2 641 aaKnown RBP13.39□□□□□ -0.27
SCAF4-202ENST00000399804 MAGED1Q9Y5V3 778 aaPredicted RBP13.39□□□□□ -0.27
SCAF4-202ENST00000399804 ARRB1P49407 418 aaPredicted RBP13.39□□□□□ -0.27
SCAF4-202ENST00000399804 NUDT6P53370 316 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 NFATC4Q14934 902 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 AVL9Q8NBF6 648 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 WDR36Q8NI36 951 aaKnown RBP13.39□□□□□ -0.27
SCAF4-202ENST00000399804 PIGXQ8TBF5 258 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.39□□□□□ -0.27
SCAF4-202ENST00000399804 KAT8Q9H7Z6 458 aaKnown RBP13.39□□□□□ -0.27
SCAF4-202ENST00000399804 DCAF13Q9NV06 445 aaKnown RBP13.39□□□□□ -0.27
SCAF4-202ENST00000399804 ZSCAN32Q9NX65 697 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 TOR4AQ9NXH8 423 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 GALNT8Q9NY28 637 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 CNOT11Q9UKZ1 510 aaKnown RBP13.39□□□□□ -0.27
SCAF4-202ENST00000399804 WDR45Q9Y484 360 aa13.39□□□□□ -0.27
SCAF4-202ENST00000399804 SEC16AO15027 2179 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 CXorf51AA0A1B0GTR3 108 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 PNMA8CA0A1B0GUJ8 204 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 H3BNH8 94 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 ELK4P28324 431 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 ACSL1P33121 698 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 CDKN2CP42773 168 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 HBA1P69905 142 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 HYAL1Q12794 435 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 RANBP3LQ86VV4 465 aaPredicted RBP13.38□□□□□ -0.27
SCAF4-202ENST00000399804 GJD3Q8N144 294 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 Q8N9G6 341 aaPredicted RBP13.38□□□□□ -0.27
SCAF4-202ENST00000399804 LRRC3BQ96PB8 259 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 ZDHHC5Q9C0B5 715 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 NUAK2Q9H093 628 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 AGPAT4Q9NRZ5 378 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 MS4A12Q9NXJ0 267 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 OR6C2Q9NZP2 312 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 AKAP7Q9P0M2 348 aaPredicted RBP13.38□□□□□ -0.27
SCAF4-202ENST00000399804 CDV3Q9UKY7 258 aaKnown RBP13.38□□□□□ -0.27
SCAF4-202ENST00000399804 PTPRZ1P23471 2315 aaPredicted RBP13.38□□□□□ -0.27
SCAF4-202ENST00000399804 RNASET2O00584 256 aaKnown RBP13.38□□□□□ -0.27
SCAF4-202ENST00000399804 GMFGO60234 142 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 NPTX1Q15818 432 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 UGT8Q16880 541 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 TDHQ8IZJ6 230 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 METTL27Q8N6F8 245 aaPredicted RBP13.38□□□□□ -0.27
SCAF4-202ENST00000399804 CSNK1A1LQ8N752 337 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 OR51I1Q9H343 314 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 FGF22Q9HCT0 170 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 SLC23A2Q9UGH3 650 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 GTF2A1LQ9UNN4 478 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 HCN4Q9Y3Q4 1203 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 TMEM150CB9EJG8 249 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 H0YJX3 145 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 SDC3O75056 442 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 ZNF821O75541 412 aaPredicted RBP13.38□□□□□ -0.27
SCAF4-202ENST00000399804 DDCP20711 480 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 TIAL1Q01085 375 aaKnown RBP eCLIP13.38□□□□□ -0.272e-6■■■■□ 22
SCAF4-202ENST00000399804 DEFB110Q30KQ9 67 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 METRNLQ641Q3 311 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 POMZP3Q6PJE2 187 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 CARM1Q86X55 608 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 SFTPA1Q8IWL2 248 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 NUP43Q8NFH3 380 aa13.38□□□□□ -0.27
SCAF4-202ENST00000399804 YTHDF1Q9BYJ9 559 aaKnown RBP13.38□□□□□ -0.27
SCAF4-202ENST00000399804 RSPH9Q9H1X1 276 aaPredicted RBP13.38□□□□□ -0.27
SCAF4-202ENST00000399804 GIN1Q9NXP7 522 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms