RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 TRIM49D1C9J1S8 452 aa13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 RTCAO00442 366 aaKnown RBP13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 FCHO1O14526 889 aa13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 SIX3O95343 332 aaPredicted RBP13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 STSP08842 583 aa13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 TPP2P29144 1249 aaPredicted RBP13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 SSR2P43308 183 aa13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 GPR143P51810 404 aa13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 OC90Q02509 493 aaPredicted RBP13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 SERTAD2Q14140 314 aa13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 LGSNQ5TDP6 509 aa13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 OR4C11Q6IEV9 310 aa13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 MYLK4Q86YV6 388 aaPredicted RBP13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 TMEM132CQ8N3T6 1108 aa13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 RGMAQ96B86 450 aa13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 MAPKAP1Q9BPZ7 522 aa13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 MRPL57Q9BQC6 102 aaKnown RBP13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 MS4A12Q9NXJ0 267 aa13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 ANKRD10Q9NXR5 420 aa13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 LRFN1Q9P244 771 aa13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 VTI1BQ9UEU0 232 aa13.88□□□□□ -0.19
SMIM11A-203ENST00000399299 ASPDHA6ND91 283 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 PLPP1O14494 284 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 SMIM24O75264 130 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 CLDN9O95484 217 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 PTX3P26022 381 aaPredicted RBP13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 EEF1DP29692 281 aaKnown RBP13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 PPP2R1BP30154 601 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 CYB561P49447 251 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 HLCSP50747 726 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 RAP1GDS1P52306 607 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 DDX39BQ13838 428 aaKnown RBP13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 C10orf62Q5T681 223 aaPredicted RBP13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 SPINK14Q6IE38 97 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 SLC25A25Q6KCM7 469 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 TIFABQ6ZNK6 161 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 CLNKQ7Z7G1 428 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 ZCCHC7Q8N3Z6 543 aaKnown RBP13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 OR14A16Q8NHC5 309 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 UHMK1Q8TAS1 419 aaKnown RBP13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 WDR20Q8TBZ3 569 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 DAZLQ92904 295 aaKnown RBP13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 NCLNQ969V3 563 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 MTBPQ96DY7 904 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 SCYL1Q96KG9 808 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 MTERF1Q99551 399 aaKnown RBP13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 CCDC77Q9BR77 488 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 NTMT1Q9BV86 223 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 HES7Q9BYE0 225 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 ALOXE3Q9BYJ1 711 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 MRPL46Q9H2W6 279 aaKnown RBP13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 PRM3Q9NNZ6 103 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 PLEKHB1Q9UF11 243 aaPredicted RBP13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 FETUBQ9UGM5 382 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 PHF11Q9UIL8 331 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 ZNF223Q9UK11 482 aaPredicted RBP13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 PCTPQ9UKL6 214 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 OSGIN2Q9Y236 505 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 RNF11Q9Y3C5 154 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 CLCA3PQ9Y6N3 262 aa13.87□□□□□ -0.19
SMIM11A-203ENST00000399299 CYSRT1A8MQ03 144 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 FOXE1O00358 373 aaPredicted RBP13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 OR7A17O14581 309 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 RIPK2O43353 540 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 SH3BGRLO75368 114 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 SLC25A12O75746 678 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 MLYCDO95822 493 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 SP1P08047 785 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 RPS17P08708 135 aaKnown RBP13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 MST1P26927 711 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 GCAP28676 217 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 PER3P56645 1201 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 RPS13P62277 151 aaKnown RBP13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 IGLV3-21P80748 117 aaPredicted RBP13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 PMP22Q01453 160 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 STX4Q12846 297 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 SLAMF1Q13291 335 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 BIKQ13323 160 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 CUL3Q13618 768 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 ZRSR2Q15696 482 aaKnown RBP13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 CPSF6Q16630 551 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 ZNF468Q5VIY5 522 aaPredicted RBP13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 ADGRD1Q6QNK2 874 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 GFRALQ6UXV0 394 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 LCA5Q86VQ0 697 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 ZNF227Q86WZ6 799 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 RNF175Q8N4F7 328 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 FAM98AQ8NCA5 519 aaKnown RBP13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 MORN4Q8NDC4 146 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 PHF21BQ96EK2 531 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 FRMD6Q96NE9 622 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 ZNF717Q9BY31 904 aaPredicted RBP13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 TXLNGYQ9BZA5 131 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 NOL11Q9H8H0 719 aaKnown RBP13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 KLHL1Q9NR64 748 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 SEC14L3Q9UDX4 400 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 FBXW2Q9UKT8 454 aa13.86□□□□□ -0.19
SMIM11A-203ENST00000399299 A0A1B0GUH1 482 aa13.85□□□□□ -0.19
SMIM11A-203ENST00000399299 SAP18O00422 153 aaKnown RBP13.85□□□□□ -0.19
SMIM11A-203ENST00000399299 NME2P1O60361 137 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms