RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 CRISP1P54107 249 aa24.4■■□□□ 1.5
COL13A1-203ENST00000398969 MED22Q15528 200 aa24.4■■□□□ 1.5
COL13A1-203ENST00000398969 POF1BQ8WVV4 589 aa24.4■■□□□ 1.5
COL13A1-203ENST00000398969 SLC5A11Q8WWX8 675 aa24.4■■□□□ 1.5
COL13A1-203ENST00000398969 MGLLQ99685 303 aa24.4■■□□□ 1.5
COL13A1-203ENST00000398969 NMNAT1Q9HAN9 279 aaPredicted RBP24.4■■□□□ 1.5
COL13A1-203ENST00000398969 KIAA0513O60268 411 aa24.4■■□□□ 1.5
COL13A1-203ENST00000398969 MPZL2O60487 215 aa24.4■■□□□ 1.5
COL13A1-203ENST00000398969 DNTTP04053 509 aa24.4■■□□□ 1.5
COL13A1-203ENST00000398969 IFNW1P05000 195 aa24.4■■□□□ 1.5
COL13A1-203ENST00000398969 IL3P08700 152 aa24.4■■□□□ 1.5
COL13A1-203ENST00000398969 TSTQ16762 297 aaKnown RBP24.4■■□□□ 1.5
COL13A1-203ENST00000398969 ZNF770Q6IQ21 691 aaPredicted RBP24.4■■□□□ 1.5
COL13A1-203ENST00000398969 NXPE4Q6UWF7 544 aa24.4■■□□□ 1.5
COL13A1-203ENST00000398969 PTCHD4Q6ZW05 846 aa24.4■■□□□ 1.5
COL13A1-203ENST00000398969 ATCAYQ86WG3 371 aa24.4■■□□□ 1.5
COL13A1-203ENST00000398969 LRRC56Q8IYG6 542 aaPredicted RBP24.4■■□□□ 1.5
COL13A1-203ENST00000398969 MMP21Q8N119 569 aa24.4■■□□□ 1.5
COL13A1-203ENST00000398969 SPPL3Q8TCT6 385 aa24.4■■□□□ 1.5
COL13A1-203ENST00000398969 SLC6A16Q9GZN6 736 aa24.4■■□□□ 1.5
COL13A1-203ENST00000398969 ALOX12P18054 663 aa24.39■■□□□ 1.5
COL13A1-203ENST00000398969 CNR2P34972 360 aa24.39■■□□□ 1.5
COL13A1-203ENST00000398969 DSTNP60981 165 aa24.39■■□□□ 1.5
COL13A1-203ENST00000398969 TAP2Q03519 686 aa24.39■■□□□ 1.5
COL13A1-203ENST00000398969 DUSP7Q16829 419 aa24.39■■□□□ 1.5
COL13A1-203ENST00000398969 LY6G5CQ5SRR4 150 aa24.39■■□□□ 1.5
COL13A1-203ENST00000398969 ATAD3BQ5T9A4 648 aa24.39■■□□□ 1.5
COL13A1-203ENST00000398969 FRMPD2BQ6IN97 320 aa24.39■■□□□ 1.5
COL13A1-203ENST00000398969 SCAIQ8N9R8 606 aa24.39■■□□□ 1.5
COL13A1-203ENST00000398969 OR9A1PQ8NGU1 263 aa24.39■■□□□ 1.5
COL13A1-203ENST00000398969 MIR1-1HGQ9H1L0 117 aa24.39■■□□□ 1.5
COL13A1-203ENST00000398969 EPHX3Q9H6B9 360 aa24.39■■□□□ 1.5
COL13A1-203ENST00000398969 CLN6Q9NWW5 311 aa24.39■■□□□ 1.5
COL13A1-203ENST00000398969 DKK3Q9UBP4 350 aa24.39■■□□□ 1.5
COL13A1-203ENST00000398969 CAB39Q9Y376 341 aaPredicted RBP24.39■■□□□ 1.5
COL13A1-203ENST00000398969 MTCL1Q9Y4B5 1905 aaKnown RBP24.39■■□□□ 1.49
COL13A1-203ENST00000398969 SNPHO15079 494 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 HOXD12P35452 270 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 DOC2BQ14184 412 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 CARTPTQ16568 116 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 UNC5DQ6UXZ4 953 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 SLC44A2Q8IWA5 706 aaPredicted RBP24.38■■□□□ 1.49
COL13A1-203ENST00000398969 ZNF740Q8NDX6 193 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 TCEAL4Q96EI5 215 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 KCND3Q9UK17 655 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 PCDHGB6Q9Y5F9 930 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 MN1Q10571 1320 aaPredicted RBP24.38■■□□□ 1.49
COL13A1-203ENST00000398969 FAM227AF5H4B4 570 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 SYN1P17600 705 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 MAGP20916 626 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 SOX6P35712 828 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 NNMTP40261 264 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 ETV6P41212 452 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 PUM1Q14671 1186 aaKnown RBP eCLIP24.38■■□□□ 1.49
COL13A1-203ENST00000398969 PLAG1Q6DJT9 500 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 KIAA0907Q7Z7F0 614 aaPredicted RBP24.38■■□□□ 1.49
COL13A1-203ENST00000398969 AKAP14Q86UN6 197 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 SLC30A8Q8IWU4 369 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 ZNF557Q8N988 423 aaPredicted RBP24.38■■□□□ 1.49
COL13A1-203ENST00000398969 HERVK_113Q902F9 699 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 EFHD2Q96C19 240 aaPredicted RBP24.38■■□□□ 1.49
COL13A1-203ENST00000398969 TAAR2Q9P1P5 351 aa24.38■■□□□ 1.49
COL13A1-203ENST00000398969 FFAR1O14842 300 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 LILRB5O75023 590 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 UQCRC2P22695 453 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 IRS1P35568 1242 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 PIK3CBP42338 1070 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 SLC15A1P46059 708 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 TIMM50Q3ZCQ8 353 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 BCL7AQ4VC05 210 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 DESI1Q6ICB0 168 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 NRSN1Q8IZ57 195 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 TAGAPQ8N103 731 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 VN1R2Q8NFZ6 395 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 WDR36Q8NI36 951 aaKnown RBP24.37■■□□□ 1.49
COL13A1-203ENST00000398969 PHOSPHO2Q8TCD6 241 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 SORBS1Q9BX66 1292 aaKnown RBP24.37■■□□□ 1.49
COL13A1-203ENST00000398969 CXorf36Q9H7Y0 433 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 MIEF1Q9NQG6 463 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 CFL2Q9Y281 166 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 DSPPQ9NZW4 1301 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 CCRL2O00421 344 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 ARHGAP33O14559 1287 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 POU1F1P28069 291 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 DGKEP52429 567 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 LIM2P55344 173 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 REEP3Q6NUK4 255 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 ERAP2Q6P179 960 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.37■■□□□ 1.49
COL13A1-203ENST00000398969 IKBIPQ70UQ0 350 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 APOBEC4Q8WW27 367 aaKnown RBP24.37■■□□□ 1.49
COL13A1-203ENST00000398969 ITM2CQ9NQX7 267 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 MKLN1Q9UL63 735 aa24.37■■□□□ 1.49
COL13A1-203ENST00000398969 TRBV4-1A0A0J9YWV2 114 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 SOD1P00441 154 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 EPHA5P54756 1037 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 SSX1Q16384 188 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 FAM180BQ6P0A1 224 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 TMEM53Q6P2H8 277 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 PARS2Q7L3T8 475 aaKnown RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms