RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 INSM1Q01101 510 aaPredicted RBP13.45□□□□□ -0.26
SKA1-202ENST00000398452 RCAN2Q14206 197 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 C16orf72Q14CZ0 275 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 MAPKAPK3Q16644 382 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 VPS26BQ4G0F5 336 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 TIGD2Q4W5G0 525 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 FAM71E1Q6IPT2 247 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 PRMT9Q6P2P2 845 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 UNQ6494/PRO21346Q6UXR6 183 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 CEACAM20Q6UY09 585 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 YTHDF3Q7Z739 585 aaKnown RBP13.45□□□□□ -0.26
SKA1-202ENST00000398452 B3GNT8Q7Z7M8 397 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 TREML1Q86YW5 311 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 KRTCAP2Q8N6L1 136 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 OR9A4Q8NGU2 314 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 COL26A1Q96A83 441 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 TM4SF18Q96CE8 201 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 EGLN2Q96KS0 407 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 OR52E6Q96RD3 313 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 DUSP26Q9BV47 211 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 ZNF717Q9BY31 904 aaPredicted RBP13.45□□□□□ -0.26
SKA1-202ENST00000398452 SYNPO2LQ9H987 977 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 GID8Q9NWU2 228 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 SLC39A1Q9NY26 324 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 RALYQ9UKM9 306 aaKnown RBP13.45□□□□□ -0.26
SKA1-202ENST00000398452 ENTPD4Q9Y227 616 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 LOXL2Q9Y4K0 774 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 ASXL3Q9C0F0 2248 aa13.45□□□□□ -0.26
SKA1-202ENST00000398452 KMT2BQ9UMN6 2715 aaPredicted RBP13.44□□□□□ -0.26
SKA1-202ENST00000398452 A0A1B0GX78 115 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 BLACEA4D250 179 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 B4E171 279 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 AIM2O14862 343 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 DSCR3O14972 297 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 ANKRD28O15084 1053 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 TMPRSS11DO60235 418 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 RDH16O75452 317 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 ANP32DO95626 131 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 PGRP06401 933 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 FTH1P19P0C7X4 201 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 RNH1P13489 461 aaKnown RBP13.44□□□□□ -0.26
SKA1-202ENST00000398452 FBLP22087 321 aaKnown RBP13.44□□□□□ -0.26
SKA1-202ENST00000398452 NTSP30990 170 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 TSPAN7P41732 249 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 CPA2P48052 419 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 LIM2P55344 173 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 RAB38P57729 211 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 TNFRSF17Q02223 184 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 BNIP1Q12981 228 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 ISXQ2M1V0 245 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 COQ5Q5HYK3 327 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 SPANXN4Q5MJ08 99 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 C6orf10Q5SRN2 563 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 NDUFAF5Q5TEU4 345 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 HES3Q5TGS1 186 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 TMEM164Q5U3C3 297 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 FOXR1Q6PIV2 292 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 C16orf89Q6UX73 402 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 MSANTD1Q6ZTZ1 278 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 TICAM1Q8IUC6 712 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 SAMD14Q8IZD0 417 aaPredicted RBP13.44□□□□□ -0.26
SKA1-202ENST00000398452 C10orf90Q96M02 699 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 MAPKAP1Q9BPZ7 522 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 BHLHE41Q9C0J9 482 aaPredicted RBP13.44□□□□□ -0.26
SKA1-202ENST00000398452 AICDAQ9GZX7 198 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 LHX9Q9NQ69 397 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 FBXO8Q9NRD0 319 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 FAM120CQ9NX05 1096 aaKnown RBP13.44□□□□□ -0.26
SKA1-202ENST00000398452 OCIAD1Q9NX40 245 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 EHD3Q9NZN3 535 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 ATP6V1HQ9UI12 483 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 DAPP1Q9UN19 280 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 MRPS2Q9Y399 296 aaKnown RBP13.44□□□□□ -0.26
SKA1-202ENST00000398452 ZNF780BQ9Y6R6 833 aa13.44□□□□□ -0.26
SKA1-202ENST00000398452 MDC1Q14676 2089 aaKnown RBP13.44□□□□□ -0.26
SKA1-202ENST00000398452 CCDC187A0A096LP49 1063 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 B2RBV5 119 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 C4orf51C9J302 202 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 C9JVG2 144 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 CLDN4O14493 209 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 MRASO14807 208 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 NVLO15381 856 aaKnown RBP13.43□□□□□ -0.26
SKA1-202ENST00000398452 CPNE3O75131 537 aaKnown RBP13.43□□□□□ -0.26
SKA1-202ENST00000398452 UNC5CO95185 931 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 B3GALT4O96024 378 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 CTSBP07858 339 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 KRT16P08779 473 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 FURINP09958 794 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 FGF5P12034 268 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 AGXTP21549 392 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 PPP2R1BP30154 601 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 NUDT2P50583 147 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 MAPK10P53779 464 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 OLR1P78380 273 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 MC2RQ01718 297 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 NFYCQ13952 458 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.43□□□□□ -0.26
SKA1-202ENST00000398452 DCAF12Q5T6F0 453 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 ARHGAP40Q5TG30 622 aa13.43□□□□□ -0.26
SKA1-202ENST00000398452 REP15Q6BDI9 236 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms