RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 SMURF1Q9HCE7 757 aa12.37□□□□□ -0.43
CCBE1-201ENST00000398179 EBF1Q9UH73 591 aa12.37□□□□□ -0.43
CCBE1-201ENST00000398179 NRP2O60462 931 aa12.37□□□□□ -0.43
CCBE1-201ENST00000398179 NDST3O95803 873 aa12.37□□□□□ -0.43
CCBE1-201ENST00000398179 F9P00740 461 aa12.37□□□□□ -0.43
CCBE1-201ENST00000398179 ATP6AP1LQ52LC2 224 aa12.37□□□□□ -0.43
CCBE1-201ENST00000398179 PHYHD1Q5SRE7 291 aa12.37□□□□□ -0.43
CCBE1-201ENST00000398179 PXT1Q8NFP0 134 aa12.37□□□□□ -0.43
CCBE1-201ENST00000398179 DCPSQ96C86 337 aaKnown RBP12.37□□□□□ -0.43
CCBE1-201ENST00000398179 SEMA4AQ9H3S1 761 aa12.37□□□□□ -0.43
CCBE1-201ENST00000398179 XDHP47989 1333 aa12.37□□□□□ -0.43
CCBE1-201ENST00000398179 ARPC3O15145 178 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 CSF2P04141 144 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 PAEPP09466 180 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 NME1P15531 152 aaKnown RBP12.36□□□□□ -0.43
CCBE1-201ENST00000398179 FECHP22830 423 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 DUSP7Q16829 419 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 CPA6Q8N4T0 437 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 SCARB1Q8WTV0 552 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 SMARCD2Q92925 531 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 HSFY1Q96LI6 401 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 PINK1Q9BXM7 581 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 NXF3Q9H4D5 531 aaKnown RBP12.36□□□□□ -0.43
CCBE1-201ENST00000398179 MBNL1Q9NR56 388 aaKnown RBP12.36□□□□□ -0.43
CCBE1-201ENST00000398179 GLRX2Q9NS18 164 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 ADCY10Q96PN6 1610 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 MYMKA6NI61 221 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 MRASO14807 208 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 CCR1P32246 355 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 CDKN1CP49918 316 aaPredicted RBP12.36□□□□□ -0.43
CCBE1-201ENST00000398179 HECTD2Q5U5R9 776 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 OR10W1Q8NGF6 305 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 CMKLR1Q99788 373 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 TBL1YQ9BQ87 522 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 PIGMQ9H3S5 423 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 ARHGAP20Q9P2F6 1191 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 LOC105371267A0A1B0GV96 52 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 GJB6O95452 261 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 CPN2P22792 545 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 IGFBP5P24593 272 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 CCR7P32248 378 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 MAP2K4P45985 399 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 GTF2A2P52657 109 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 OR2B8PP59922 312 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 GRIK2Q13002 908 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 CTBP1Q13363 440 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 ZNF789Q5FWF6 425 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 YIPF5Q969M3 257 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 SLC35C1Q96A29 364 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 ELP4Q96EB1 424 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 SRRQ9GZT4 340 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 MRPS30Q9NP92 439 aaKnown RBP12.36□□□□□ -0.43
CCBE1-201ENST00000398179 MIEF1Q9NQG6 463 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 PRDM7Q9NQW5 492 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 LIPT1Q9Y234 373 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 CACNG2Q9Y698 323 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 CLASP1Q7Z460 1538 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 CTDSP2O14595 271 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 F2RP25116 425 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 EPHA2P29317 976 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 HTRA3P83110 453 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 GINS1Q14691 196 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 DHRS4L2Q6PKH6 230 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 ADGRF3Q8IZF5 1079 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 OR9K2Q8NGE7 335 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 REEP1Q9H902 201 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 KLHL21Q9UJP4 597 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 DHRS12A0PJE2 317 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 IGSF6O95976 241 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 DGKGP49619 791 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 GPR15P49685 360 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 H3F3AP84243 136 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 NLGN1Q8N2Q7 840 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 FIBCD1Q8N539 461 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 ZPBPQ9BS86 351 aa12.36□□□□□ -0.43
CCBE1-201ENST00000398179 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.36□□□□□ -0.43
CCBE1-201ENST00000398179 SMAD7O15105 426 aaKnown RBP12.35□□□□□ -0.43
CCBE1-201ENST00000398179 AMD1P17707 334 aa12.35□□□□□ -0.43
CCBE1-201ENST00000398179 FPR3P25089 353 aa12.35□□□□□ -0.43
CCBE1-201ENST00000398179 CD82P27701 267 aa12.35□□□□□ -0.43
CCBE1-201ENST00000398179 CORO1AP31146 461 aaKnown RBP12.35□□□□□ -0.43
CCBE1-201ENST00000398179 PLP1P60201 277 aa12.35□□□□□ -0.43
CCBE1-201ENST00000398179 PDIA6Q15084 440 aa12.35□□□□□ -0.43
CCBE1-201ENST00000398179 OR52E8Q6IFG1 317 aa12.35□□□□□ -0.43
CCBE1-201ENST00000398179 ZNF438Q7Z4V0 828 aa12.35□□□□□ -0.43
CCBE1-201ENST00000398179 PCDH20Q8N6Y1 951 aaKnown RBP12.35□□□□□ -0.43
CCBE1-201ENST00000398179 HTR3CQ8WXA8 447 aa12.35□□□□□ -0.43
CCBE1-201ENST00000398179 C1GALT1Q9NS00 363 aa12.35□□□□□ -0.43
CCBE1-201ENST00000398179 CNTN3Q9P232 1028 aa12.35□□□□□ -0.43
CCBE1-201ENST00000398179 ZNHIT2Q9UHR6 403 aa12.35□□□□□ -0.43
CCBE1-201ENST00000398179 TNFSF13BQ9Y275 285 aa12.35□□□□□ -0.43
CCBE1-201ENST00000398179 YARS2Q9Y2Z4 477 aaKnown RBP12.35□□□□□ -0.43
CCBE1-201ENST00000398179 GPSM3Q9Y4H4 160 aa12.35□□□□□ -0.43
CCBE1-201ENST00000398179 HELTA6NFD8 242 aa12.35□□□□□ -0.43
CCBE1-201ENST00000398179 MGAT4DA6NG13 374 aa12.35□□□□□ -0.43
CCBE1-201ENST00000398179 TRIM77I1YAP6 450 aa12.35□□□□□ -0.43
CCBE1-201ENST00000398179 SGCGQ13326 291 aa12.35□□□□□ -0.43
CCBE1-201ENST00000398179 PRPF38BQ5VTL8 546 aaKnown RBP12.35□□□□□ -0.43
CCBE1-201ENST00000398179 MAP1SQ66K74 1059 aaPredicted RBP12.35□□□□□ -0.43
CCBE1-201ENST00000398179 BLOC1S3Q6QNY0 202 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms