RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 SOX17Q9H6I2 414 aaPredicted RBP23.96■■□□□ 1.43
U2AF1-203ENST00000398137 VPS29Q9UBQ0 182 aa23.96■■□□□ 1.43
U2AF1-203ENST00000398137 IGLV3-12A0A075B6K2 115 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 CLEC18AA5D8T8 446 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 MASP2O00187 686 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 SNNO75324 88 aaPredicted RBP23.95■■□□□ 1.42
U2AF1-203ENST00000398137 EEDO75530 441 aaKnown RBP23.95■■□□□ 1.42
U2AF1-203ENST00000398137 SKAP2O75563 359 aaPredicted RBP23.95■■□□□ 1.42
U2AF1-203ENST00000398137 JRKO75564 520 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 SCELO95171 688 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 OTX2P32243 289 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 BSGP35613 385 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 FOLR3P41439 243 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 CD97P48960 835 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 SSPNQ14714 243 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 IMPG1Q17R60 797 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 UGT3A2Q3SY77 523 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 CLEC18BQ6UXF7 455 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 MED25Q71SY5 747 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 DDIASQ8IXT1 998 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 CA13Q8N1Q1 262 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 TMEM102Q8N9M5 508 aaPredicted RBP23.95■■□□□ 1.42
U2AF1-203ENST00000398137 CLEC18CQ8NCF0 446 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 OR2Y1Q8NGV0 311 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 MIEF2Q96C03 454 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 SPSB2Q99619 263 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 WDR54Q9H977 334 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 C14orf105Q9NVL8 296 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 THAP1Q9NVV9 213 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 NMRK1Q9NWW6 199 aa23.95■■□□□ 1.42
U2AF1-203ENST00000398137 NXT1Q9UKK6 140 aaKnown RBP23.95■■□□□ 1.42
U2AF1-203ENST00000398137 SERTM1A2A2V5 107 aa23.94■■□□□ 1.42
U2AF1-203ENST00000398137 VSTM2BA6NLU5 285 aa23.94■■□□□ 1.42
U2AF1-203ENST00000398137 KLF11O14901 512 aa23.94■■□□□ 1.42
U2AF1-203ENST00000398137 PIP5K1BO14986 540 aa23.94■■□□□ 1.42
U2AF1-203ENST00000398137 SNUPNO95149 360 aaKnown RBP23.94■■□□□ 1.42
U2AF1-203ENST00000398137 ZGLP1P0C6A0 271 aa23.94■■□□□ 1.42
U2AF1-203ENST00000398137 LINC00032P0C843 101 aa23.94■■□□□ 1.42
U2AF1-203ENST00000398137 ARFIP1P53367 373 aa23.94■■□□□ 1.42
U2AF1-203ENST00000398137 TBL3Q12788 808 aaKnown RBP23.94■■□□□ 1.42
U2AF1-203ENST00000398137 COMMD6Q7Z4G1 85 aa23.94■■□□□ 1.42
U2AF1-203ENST00000398137 TRIM46Q7Z4K8 759 aa23.94■■□□□ 1.42
U2AF1-203ENST00000398137 PPP1R32Q7Z5V6 425 aa23.94■■□□□ 1.42
U2AF1-203ENST00000398137 NUDT13Q86X67 352 aa23.94■■□□□ 1.42
U2AF1-203ENST00000398137 METTL4Q8N3J2 472 aa23.94■■□□□ 1.42
U2AF1-203ENST00000398137 C1orf52Q8N6N3 182 aaKnown RBP23.94■■□□□ 1.42
U2AF1-203ENST00000398137 LRRC8CQ8TDW0 803 aa23.94■■□□□ 1.42
U2AF1-203ENST00000398137 NPLQ9BXD5 320 aaPredicted RBP23.94■■□□□ 1.42
U2AF1-203ENST00000398137 CLK4Q9HAZ1 481 aaKnown RBP23.94■■□□□ 1.42
U2AF1-203ENST00000398137 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.94■■□□□ 1.42
U2AF1-203ENST00000398137 A0A0A6YYD5 115 aa23.93■■□□□ 1.42
U2AF1-203ENST00000398137 A6NL46 340 aa23.93■■□□□ 1.42
U2AF1-203ENST00000398137 GBAP04062 536 aa23.93■■□□□ 1.42
U2AF1-203ENST00000398137 RNH1P13489 461 aaKnown RBP23.93■■□□□ 1.42
U2AF1-203ENST00000398137 TSFMP43897 325 aaKnown RBP23.93■■□□□ 1.42
U2AF1-203ENST00000398137 OCRLQ01968 901 aa23.93■■□□□ 1.42
U2AF1-203ENST00000398137 BTKQ06187 659 aa23.93■■□□□ 1.42
U2AF1-203ENST00000398137 KLC1Q07866 573 aa23.93■■□□□ 1.42
U2AF1-203ENST00000398137 SPDYAQ5MJ70 313 aa23.93■■□□□ 1.42
U2AF1-203ENST00000398137 RAB43Q86YS6 212 aa23.93■■□□□ 1.42
U2AF1-203ENST00000398137 DDX31Q9H8H2 851 aaKnown RBP23.93■■□□□ 1.42
U2AF1-203ENST00000398137 PNPOQ9NVS9 261 aa23.93■■□□□ 1.42
U2AF1-203ENST00000398137 AHSPQ9NZD4 102 aa23.93■■□□□ 1.42
U2AF1-203ENST00000398137 HAO1Q9UJM8 370 aa23.93■■□□□ 1.42
U2AF1-203ENST00000398137 SHANK1Q9Y566 2161 aa23.93■■□□□ 1.42
U2AF1-203ENST00000398137 HECTD1Q9ULT8 2610 aa23.92■■□□□ 1.42
U2AF1-203ENST00000398137 PSMD12O00232 456 aaPredicted RBP23.92■■□□□ 1.42
U2AF1-203ENST00000398137 SLC28A1O00337 649 aa23.92■■□□□ 1.42
U2AF1-203ENST00000398137 CDC123O75794 336 aaPredicted RBP23.92■■□□□ 1.42
U2AF1-203ENST00000398137 SORBS2O94875 1100 aaKnown RBP23.92■■□□□ 1.42
U2AF1-203ENST00000398137 BMP10O95393 424 aa23.92■■□□□ 1.42
U2AF1-203ENST00000398137 KLK1P06870 262 aa23.92■■□□□ 1.42
U2AF1-203ENST00000398137 CD63P08962 238 aa23.92■■□□□ 1.42
U2AF1-203ENST00000398137 RPL14P50914 215 aaKnown RBP23.92■■□□□ 1.42
U2AF1-203ENST00000398137 LIM2P55344 173 aa23.92■■□□□ 1.42
U2AF1-203ENST00000398137 SLAMF1Q13291 335 aa23.92■■□□□ 1.42
U2AF1-203ENST00000398137 PDCD2Q16342 344 aaPredicted RBP23.92■■□□□ 1.42
U2AF1-203ENST00000398137 MFSD4BQ5TF39 518 aa23.92■■□□□ 1.42
U2AF1-203ENST00000398137 RNF165Q6ZSG1 346 aa23.92■■□□□ 1.42
U2AF1-203ENST00000398137 ZCCHC7Q8N3Z6 543 aaKnown RBP23.92■■□□□ 1.42
U2AF1-203ENST00000398137 ARFGAP2Q8N6H7 521 aa23.92■■□□□ 1.42
U2AF1-203ENST00000398137 FAM47BQ8NA70 645 aa23.92■■□□□ 1.42
U2AF1-203ENST00000398137 OR2T11Q8NH01 316 aa23.92■■□□□ 1.42
U2AF1-203ENST00000398137 APIPQ96GX9 242 aa23.92■■□□□ 1.42
U2AF1-203ENST00000398137 MAPKAP1Q9BPZ7 522 aa23.92■■□□□ 1.42
U2AF1-203ENST00000398137 CRB3Q9BUF7 120 aa23.92■■□□□ 1.42
U2AF1-203ENST00000398137 TGIF2Q9GZN2 237 aa23.92■■□□□ 1.42
U2AF1-203ENST00000398137 FAM227AF5H4B4 570 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 TMPRSS11DO60235 418 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 RSL1D1O76021 490 aaKnown RBP23.91■■□□□ 1.42
U2AF1-203ENST00000398137 FHP07954 510 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 RAB38P57729 211 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 ACSM2AQ08AH3 577 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 RAPSNQ13702 412 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 MINDY4Q4G0A6 757 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 ACSM2BQ68CK6 577 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 CYP20A1Q6UW02 462 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 PAGE2Q7Z2X7 111 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 LAPTM4BQ86VI4 370 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 EFCAB3Q8N7B9 438 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms