RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 CCDC182A6NF36 153 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 WASHC1A8K0Z3 465 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 FFAR1O14842 300 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 GREM1O60565 184 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 NTN1O95631 604 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 SDHBP21912 280 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 GABRR2P28476 465 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 HLA-FP30511 346 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 HNMTP50135 292 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 ATN1P54259 1190 aaPredicted RBP13.13□□□□□ -0.31
COL6A2-203ENST00000397763 RAB25P57735 213 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 IRF5Q13568 498 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 ZNF79Q15937 498 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 LYPLAL1Q5VWZ2 237 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 C22orf42Q6IC83 251 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 FRMPD2BQ6IN97 320 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 WASH2PQ6VEQ5 465 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 SNAPC3Q92966 411 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 CLP1Q92989 425 aaKnown RBP13.13□□□□□ -0.31
COL6A2-203ENST00000397763 TMCO6Q96DC7 493 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 PLCXD1Q9NUJ7 323 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 TMEM39AQ9NV64 488 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 FKBP14Q9NWM8 211 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 HCN4Q9Y3Q4 1203 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 NUMA1Q14980 2115 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 A0A1W2PQ72 361 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 SGTAO43765 313 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 NME6O75414 186 aaPredicted RBP13.13□□□□□ -0.31
COL6A2-203ENST00000397763 CCNYL3P0C7X3 344 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 CRISP1P54107 249 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 PUM1Q14671 1186 aaKnown RBP eCLIP13.13□□□□□ -0.31
COL6A2-203ENST00000397763 MPPE1Q53F39 396 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 PLAG1Q6DJT9 500 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 ZNF461Q8TAF7 563 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 CHAC2Q8WUX2 184 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 IL17FQ96PD4 163 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 GFM1Q96RP9 751 aaKnown RBP13.13□□□□□ -0.31
COL6A2-203ENST00000397763 PRR14Q9BWN1 585 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 CLN6Q9NWW5 311 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 TVP23BQ9NYZ1 205 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 PRELID1Q9Y255 219 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 CFL2Q9Y281 166 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 PRKAB1Q9Y478 270 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 SNX11Q9Y5W9 270 aa13.13□□□□□ -0.31
COL6A2-203ENST00000397763 ANKDD1BA6NHY2 528 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 FADS2P1A8MWK0 482 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 CAPN5O15484 640 aaPredicted RBP13.12□□□□□ -0.31
COL6A2-203ENST00000397763 SEMA7AO75326 666 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 CSO75390 466 aaKnown RBP13.12□□□□□ -0.31
COL6A2-203ENST00000397763 TNFRSF21O75509 655 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 BCHEP06276 602 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 YES1P07947 543 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 HBQ1P09105 142 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 CBSLP0DN79 551 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 IL7P13232 177 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 ENDOUP21128 410 aaKnown RBP13.12□□□□□ -0.31
COL6A2-203ENST00000397763 IMPA1P29218 277 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 CBSP35520 551 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 P2RX3P56373 397 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 SLBPQ14493 270 aaKnown RBP eCLIP13.12□□□□□ -0.31
COL6A2-203ENST00000397763 ASTLQ6HA08 431 aaPredicted RBP13.12□□□□□ -0.31
COL6A2-203ENST00000397763 SLC8B1Q6J4K2 584 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 CYB5D2Q8WUJ1 264 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 TMEM159Q96B96 161 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 PPCDCQ96CD2 204 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 PIP5K1AQ99755 562 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 ZNF717Q9BY31 904 aaPredicted RBP13.12□□□□□ -0.31
COL6A2-203ENST00000397763 STARD7Q9NQZ5 370 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 CCDC59Q9P031 241 aaKnown RBP13.12□□□□□ -0.31
COL6A2-203ENST00000397763 PCM1Q15154 2024 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 TRAV19A0A0A6YYK7 116 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 AKR7A2O43488 359 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 TMCC2O75069 709 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 CBLP22681 906 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 TIA1P31483 386 aaKnown RBP eCLIP13.12□□□□□ -0.31
COL6A2-203ENST00000397763 CSNK2BP67870 215 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 RUNX1T1Q06455 604 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 HNRNPA0Q13151 305 aaKnown RBP13.12□□□□□ -0.31
COL6A2-203ENST00000397763 NFE2L1Q14494 772 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 VEPH1Q14D04 833 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 OR2G6Q5TZ20 316 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 SIGIRRQ6IA17 410 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.12□□□□□ -0.31
COL6A2-203ENST00000397763 PGBD3Q8N328 593 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 PCSK9Q8NBP7 692 aaKnown RBP13.12□□□□□ -0.31
COL6A2-203ENST00000397763 DENND6BQ8NEG7 585 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 ASZ1Q8WWH4 475 aa13.12□□□□□ -0.31
COL6A2-203ENST00000397763 WRAP53Q9BUR4 548 aaKnown RBP13.12□□□□□ -0.31
COL6A2-203ENST00000397763 HELZP42694 1942 aaKnown RBP13.11□□□□□ -0.31
COL6A2-203ENST00000397763 TLR4O00206 839 aa13.11□□□□□ -0.31
COL6A2-203ENST00000397763 RECKO95980 971 aa13.11□□□□□ -0.31
COL6A2-203ENST00000397763 PRPH2P23942 346 aa13.11□□□□□ -0.31
COL6A2-203ENST00000397763 CHRNEQ04844 493 aa13.11□□□□□ -0.31
COL6A2-203ENST00000397763 RNF180Q86T96 592 aa13.11□□□□□ -0.31
COL6A2-203ENST00000397763 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.11□□□□□ -0.31
COL6A2-203ENST00000397763 UCN3Q969E3 161 aa13.11□□□□□ -0.31
COL6A2-203ENST00000397763 SMAD5Q99717 465 aaKnown RBP13.11□□□□□ -0.31
COL6A2-203ENST00000397763 FAM83DQ9H4H8 585 aa13.11□□□□□ -0.31
COL6A2-203ENST00000397763 C1GALT1Q9NS00 363 aa13.11□□□□□ -0.31
COL6A2-203ENST00000397763 MAT2BQ9NZL9 334 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms