RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 ZNF551Q7Z340 670 aaPredicted RBP14.71□□□□□ -0.05
LSS-202ENST00000397728 OR8H2Q8N162 312 aa14.71□□□□□ -0.05
LSS-202ENST00000397728 ASB11Q8WXH4 323 aa14.71□□□□□ -0.05
LSS-202ENST00000397728 DIO2Q92813 273 aa14.71□□□□□ -0.05
LSS-202ENST00000397728 G6PC3Q9BUM1 346 aa14.71□□□□□ -0.05
LSS-202ENST00000397728 B4GALT7Q9UBV7 327 aa14.71□□□□□ -0.05
LSS-202ENST00000397728 MED31Q9Y3C7 131 aa14.71□□□□□ -0.05
LSS-202ENST00000397728 SNX4O95219 450 aa14.71□□□□□ -0.05
LSS-202ENST00000397728 OR5F1O95221 314 aa14.71□□□□□ -0.05
LSS-202ENST00000397728 XRCC1P18887 633 aaPredicted RBP14.71□□□□□ -0.05
LSS-202ENST00000397728 FOLH1Q04609 750 aa14.71□□□□□ -0.05
LSS-202ENST00000397728 KCTD11Q693B1 232 aa14.71□□□□□ -0.05
LSS-202ENST00000397728 NANOGNBQ7Z5D8 188 aa14.71□□□□□ -0.05
LSS-202ENST00000397728 EFHD2Q96C19 240 aaPredicted RBP14.71□□□□□ -0.05
LSS-202ENST00000397728 TM7SF3Q9NS93 570 aa14.71□□□□□ -0.05
LSS-202ENST00000397728 SLC6A14Q9UN76 642 aa14.71□□□□□ -0.05
LSS-202ENST00000397728 HS3ST3A1Q9Y663 406 aa14.71□□□□□ -0.05
LSS-202ENST00000397728 RPL34P49207 117 aaKnown RBP14.71□□□□□ -0.05
LSS-202ENST00000397728 TYSND1Q2T9J0 566 aa14.71□□□□□ -0.05
LSS-202ENST00000397728 FIGNL1Q6PIW4 674 aa14.71□□□□□ -0.05
LSS-202ENST00000397728 TMEM151BQ8IW70 566 aa14.71□□□□□ -0.05
LSS-202ENST00000397728 ZNF317Q96PQ6 595 aaPredicted RBP14.71□□□□□ -0.05
LSS-202ENST00000397728 ALOXE3Q9BYJ1 711 aa14.71□□□□□ -0.05
LSS-202ENST00000397728 DDX28Q9NUL7 540 aaKnown RBP14.71□□□□□ -0.05
LSS-202ENST00000397728 SMPD3Q9NY59 655 aaPredicted RBP14.71□□□□□ -0.05
LSS-202ENST00000397728 PPP4R1LQ9P1A2 415 aa14.71□□□□□ -0.05
LSS-202ENST00000397728 DIRAS1O95057 198 aa14.71□□□□□ -0.06
LSS-202ENST00000397728 RORAP35398 523 aa14.71□□□□□ -0.06
LSS-202ENST00000397728 NKX3-2P78367 333 aa14.71□□□□□ -0.06
LSS-202ENST00000397728 GFOD2Q3B7J2 385 aa14.71□□□□□ -0.06
LSS-202ENST00000397728 RAB43Q86YS6 212 aa14.71□□□□□ -0.06
LSS-202ENST00000397728 LGI4Q8N135 537 aa14.71□□□□□ -0.06
LSS-202ENST00000397728 TRIM2Q9C040 744 aa14.71□□□□□ -0.06
LSS-202ENST00000397728 HDHD2Q9H0R4 259 aa14.71□□□□□ -0.06
LSS-202ENST00000397728 IL37Q9NZH6 218 aa14.71□□□□□ -0.06
LSS-202ENST00000397728 KLHL42Q9P2K6 505 aa14.71□□□□□ -0.06
LSS-202ENST00000397728 DNAJB9Q9UBS3 223 aa14.71□□□□□ -0.06
LSS-202ENST00000397728 MRPS7Q9Y2R9 242 aaKnown RBP14.71□□□□□ -0.06
LSS-202ENST00000397728 SPTA1P02549 2419 aa14.71□□□□□ -0.06
LSS-202ENST00000397728 QSER1Q2KHR3 1735 aa14.71□□□□□ -0.06
LSS-202ENST00000397728 MROH6A6NGR9 719 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 EFCAB7A8K855 629 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 NOBOXO60393 691 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 CDKL4Q5MAI5 379 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 Q6ZNB5 142 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 C6orf120Q7Z4R8 191 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 SPRED2Q7Z698 418 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 TSPAN14Q8NG11 270 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 OR10G2Q8NGC3 310 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 OR6N1Q8NGY5 312 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 NEK7Q8TDX7 302 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 OR1E3Q8WZA6 343 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 ZNF707Q96C28 371 aaPredicted RBP14.7□□□□□ -0.06
LSS-202ENST00000397728 APIPQ96GX9 242 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 FARSBQ9NSD9 589 aaKnown RBP14.7□□□□□ -0.06
LSS-202ENST00000397728 MAGEB3O15480 346 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 YKT6O15498 198 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 CLEC3AO75596 197 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 RENP00797 406 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 ST3GAL3Q11203 375 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 C7orf57Q8NEG2 295 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 CANT1Q8WVQ1 401 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 BIRC7Q96CA5 298 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 DCBLD2Q96PD2 775 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 SEC61A2Q9H9S3 476 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 SLC35C2Q9NQQ7 365 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 ACSL6Q9UKU0 697 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 MICAL3Q7RTP6 2002 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 AKAP8O43823 692 aaKnown RBP14.7□□□□□ -0.06
LSS-202ENST00000397728 CREG1O75629 220 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 GBX1Q14549 363 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 SYCE2Q6PIF2 218 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 TMPRSS11AQ6ZMR5 421 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 OR5K2Q8NHB8 316 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 DNAJA3Q96EY1 480 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 MCHR1Q99705 422 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 NUAK2Q9H093 628 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 BLOC1S5-TXNDC5H3BN57 136 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 CDC40O60508 579 aaKnown RBP eCLIP14.7□□□□□ -0.065e-7■■■□□ 15.4
LSS-202ENST00000397728 CHN2P52757 468 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 PRDX1Q06830 199 aaKnown RBP14.7□□□□□ -0.06
LSS-202ENST00000397728 ZCCHC12Q6PEW1 402 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 UBQLNLQ8IYU4 475 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 C16orf78Q8WTQ4 265 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 L3HYPDHQ96EM0 354 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 RNF121Q9H920 327 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 FANCFQ9NPI8 374 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 CUEDC1Q9NWM3 386 aaPredicted RBP14.7□□□□□ -0.06
LSS-202ENST00000397728 MCM8Q9UJA3 840 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 ITGB1BP2Q9UKP3 347 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 AP1M2Q9Y6Q5 423 aa14.7□□□□□ -0.06
LSS-202ENST00000397728 TPRP12270 2363 aaKnown RBP14.69□□□□□ -0.06
LSS-202ENST00000397728 TMEM202A6NGA9 273 aa14.69□□□□□ -0.06
LSS-202ENST00000397728 K7ESM1 405 aa14.69□□□□□ -0.06
LSS-202ENST00000397728 P04436 131 aa14.69□□□□□ -0.06
LSS-202ENST00000397728 OPRD1P41143 372 aa14.69□□□□□ -0.06
LSS-202ENST00000397728 CAMK1Q14012 370 aa14.69□□□□□ -0.06
LSS-202ENST00000397728 FRRS1Q6ZNA5 592 aa14.69□□□□□ -0.06
LSS-202ENST00000397728 ATCAYQ86WG3 371 aa14.69□□□□□ -0.06
LSS-202ENST00000397728 PLPP6Q8IY26 295 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms