RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 KLHL42Q9P2K6 505 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 DKK3Q9UBP4 350 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 CASKO14936 926 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 NR2F6P10588 404 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 HMGA1P17096 107 aaKnown RBP14.07□□□□□ -0.16
CCNF-202ENST00000397066 POLR2EP19388 210 aaKnown RBP14.07□□□□□ -0.16
CCNF-202ENST00000397066 LHCGRP22888 699 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 SPINT3P49223 89 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 POLR2LP62875 67 aaKnown RBP14.07□□□□□ -0.16
CCNF-202ENST00000397066 LARS2Q15031 903 aaKnown RBP14.07□□□□□ -0.16
CCNF-202ENST00000397066 GPAT3Q53EU6 434 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 COMMD6Q7Z4G1 85 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 RASSF5Q8WWW0 418 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 RAB8BQ92930 207 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 MCCC1Q96RQ3 725 aaPredicted RBP14.07□□□□□ -0.16
CCNF-202ENST00000397066 SDHCQ99643 169 aaPredicted RBP14.07□□□□□ -0.16
CCNF-202ENST00000397066 HHATLQ9HCP6 504 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 FAM240BA0A1B0GVZ2 78 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 TSPAN6O43657 245 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 GCM2O75603 506 aaPredicted RBP14.07□□□□□ -0.16
CCNF-202ENST00000397066 ATP6V1E1P36543 226 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 RPL3P39023 403 aaKnown RBP14.07□□□□□ -0.16
CCNF-202ENST00000397066 KCNC3Q14003 757 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 ATAT1Q5SQI0 421 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 ZNF57Q68EA5 555 aaPredicted RBP14.07□□□□□ -0.16
CCNF-202ENST00000397066 OR4C15Q8NGM1 316 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 OTULINQ96BN8 352 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 CLEC4EQ9ULY5 219 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 GSTK1Q9Y2Q3 226 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 PATJQ8NI35 1801 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 GFYI3L273 518 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 CLEC2LP0C7M8 214 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 ZDHHC20Q5W0Z9 365 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 REEP3Q6NUK4 255 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 PAQR6Q6TCH4 344 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 ZNF438Q7Z4V0 828 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 TSEN54Q7Z6J9 526 aaKnown RBP14.07□□□□□ -0.16
CCNF-202ENST00000397066 OR7G1Q8NGA0 311 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 JPH3Q8WXH2 748 aaPredicted RBP14.07□□□□□ -0.16
CCNF-202ENST00000397066 NEIL2Q969S2 332 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 KCTD7Q96MP8 289 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 ACAT2Q9BWD1 397 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 ANKRA2Q9H9E1 313 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 CTPS2Q9NRF8 586 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 THSD1Q9NS62 852 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 TRPC4Q9UBN4 977 aa14.07□□□□□ -0.16
CCNF-202ENST00000397066 DNMT3AQ9Y6K1 912 aaPredicted RBP14.07□□□□□ -0.16
CCNF-202ENST00000397066 XCR1P46094 333 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 ACLYP53396 1101 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 MANFP55145 182 aaKnown RBP14.06□□□□□ -0.16
CCNF-202ENST00000397066 IL18Q14116 193 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 IRF3Q14653 427 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 DPY19L3Q6ZPD9 716 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 ATCAYQ86WG3 371 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 DACT3Q96B18 629 aaPredicted RBP14.06□□□□□ -0.16
CCNF-202ENST00000397066 CASD1Q96PB1 797 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 RIOK2Q9BVS4 552 aaKnown RBP14.06□□□□□ -0.16
CCNF-202ENST00000397066 MRPL9Q9BYD2 267 aaKnown RBP14.06□□□□□ -0.16
CCNF-202ENST00000397066 C11orf54Q9H0W9 315 aaPredicted RBP14.06□□□□□ -0.16
CCNF-202ENST00000397066 TRIM45Q9H8W5 580 aaPredicted RBP14.06□□□□□ -0.16
CCNF-202ENST00000397066 BRF2Q9HAW0 419 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 CLCA3PQ9Y6N3 262 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 AP1M2Q9Y6Q5 423 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 TMEM202A6NGA9 273 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 NME6O75414 186 aaPredicted RBP14.06□□□□□ -0.16
CCNF-202ENST00000397066 OSMP13725 252 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 GABRB1P18505 474 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 PSPHP78330 225 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 RAE1P78406 368 aaKnown RBP14.06□□□□□ -0.16
CCNF-202ENST00000397066 RHAGQ02094 409 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 SNAPC1Q16533 368 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 MZT2BQ6NZ67 158 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 METTL3Q86U44 580 aaKnown RBP14.06□□□□□ -0.16
CCNF-202ENST00000397066 VWA5B2Q8N398 1253 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 AP3S1Q92572 193 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 MRPS31Q92665 395 aaKnown RBP14.06□□□□□ -0.16
CCNF-202ENST00000397066 NELL2Q99435 816 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 RNF121Q9H920 327 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 SEC14L3Q9UDX4 400 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 SNX11Q9Y5W9 270 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 H0YIV9 168 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 SEMA3DO95025 777 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 URODP06132 367 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 H1F0P07305 194 aaKnown RBP14.06□□□□□ -0.16
CCNF-202ENST00000397066 SLC2A2P11168 524 aaPredicted RBP14.06□□□□□ -0.16
CCNF-202ENST00000397066 ETV6P41212 452 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 HTR2BP41595 481 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 CRHR2Q13324 411 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 DUSP7Q16829 419 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 FAM26DQ5JW98 314 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 GDPGP1Q6ZNW5 385 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 Q6ZVU0 165 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 TRMT11Q7Z4G4 463 aaKnown RBP14.06□□□□□ -0.16
CCNF-202ENST00000397066 CMTM8Q8IZV2 173 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 SIMC1Q8NDZ2 872 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 WDR48Q8TAF3 677 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 TEFMQ96QE5 360 aaKnown RBP14.06□□□□□ -0.16
CCNF-202ENST00000397066 BARHL1Q9BZE3 327 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 OR51B4Q9Y5P0 310 aa14.06□□□□□ -0.16
CCNF-202ENST00000397066 ZAR1LA6NP61 321 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms