RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 SMOC2Q9H3U7 446 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 RAB9BQ9NP90 201 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 ZNF69Q9UC07 566 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 INO80Q9ULG1 1556 aaPredicted RBP6.93□□□□□ -1.3
UPF2-203ENST00000397053 BORCS7-ASMTA0A0B4J1R7 106 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 GJE1A6NN92 205 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 H3BNX3 289 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 PRKD3O94806 890 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 ATG12O94817 140 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 TNFRSF8P28908 595 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 DEFA5Q01523 94 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 ZNF763Q0D2J5 394 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 ATXN7L3Q14CW9 347 aaPredicted RBP6.93□□□□□ -1.3
UPF2-203ENST00000397053 WSCD2Q2TBF2 565 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 OR2T5Q6IEZ7 315 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 TRMT10BQ6PF06 316 aaKnown RBP6.93□□□□□ -1.3
UPF2-203ENST00000397053 DLK2Q6UY11 383 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 SLC15A3Q8IY34 581 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 RASGEF1CQ8N431 466 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 OR2T29Q8NH02 315 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 OR51A7Q8NH64 312 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 PAPOLGQ9BWT3 736 aaKnown RBP6.93□□□□□ -1.3
UPF2-203ENST00000397053 TTTY10Q9BZA0 68 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 TP53TG5Q9Y2B4 290 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 SLC45A1Q9Y2W3 748 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 SQORQ9Y6N5 450 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 CDH10Q9Y6N8 788 aa6.93□□□□□ -1.3
UPF2-203ENST00000397053 PBRM1Q86U86 1689 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 ARHGAP23Q9P227 1491 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 ZNF850A8MQ14 1090 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 ABLIM1O14639 778 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 KDELR3O43731 214 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 SFTPBP07988 381 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 ZNF28P17035 718 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 HNRNPH3P31942 346 aaKnown RBP6.92□□□□□ -1.3
UPF2-203ENST00000397053 CTHP32929 405 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 SCGB2A2Q13296 93 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 MELKQ14680 651 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 PON2Q15165 354 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 FAM205BPQ63HN1 556 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 REEP3Q6NUK4 255 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 HACD2Q6Y1H2 254 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 DPY19L3Q6ZPD9 716 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 SLC5A8Q8N695 610 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 ATOH1Q92858 354 aaPredicted RBP6.92□□□□□ -1.3
UPF2-203ENST00000397053 OSTF1Q92882 214 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 MOAP1Q96BY2 351 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 APOBEC3GQ9HC16 384 aaKnown RBP6.92□□□□□ -1.3
UPF2-203ENST00000397053 SRA1Q9HD15 236 aaKnown RBP6.92□□□□□ -1.3
UPF2-203ENST00000397053 TM9SF3Q9HD45 589 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 WDR6Q9NNW5 1121 aaKnown RBP6.92□□□□□ -1.3
UPF2-203ENST00000397053 UCKL1Q9NWZ5 548 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 RNF186Q9NXI6 227 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 COPZ2Q9P299 210 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 RCCD1A6NED2 376 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 FAM155AB1AL88 458 aaPredicted RBP6.92□□□□□ -1.3
UPF2-203ENST00000397053 MANBAO00462 879 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 CYB5BO43169 146 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 ADAMTS4O75173 837 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 SOX30O94993 753 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 SOX14O95416 240 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 C6orf47O95873 294 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 CD36P16671 472 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 DPP6P42658 865 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 PXNP49023 591 aaPredicted RBP6.92□□□□□ -1.3
UPF2-203ENST00000397053 GATMP50440 423 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 ZNF81P51508 661 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 PTP4A2Q12974 167 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 BCL2A1Q16548 175 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 OR4F6Q8NGB9 312 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 OR56B2PQ8NGI1 322 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 SEC14L1Q92503 715 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 TSACCQ96A04 125 aaPredicted RBP6.92□□□□□ -1.3
UPF2-203ENST00000397053 OR51I1Q9H343 314 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 NWD1Q149M9 1564 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 SRRM3A6NNA2 597 aaPredicted RBP6.92□□□□□ -1.3
UPF2-203ENST00000397053 FLRT2O43155 660 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 MAFKO60675 156 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 PROS1P07225 676 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 ZNF12P17014 697 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 ZNF43P17038 809 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 PRDX6P30041 224 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 GKP32189 559 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 RORAP35398 523 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 UGT2B10P36537 528 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 ETV3P41162 512 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 MAGEA11P43364 429 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 NUDT6P53370 316 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 TMEM201Q5SNT2 666 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 EEF1A1P5Q5VTE0 462 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 LYSMD4Q5XG99 296 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 ERI1Q8IV48 349 aaKnown RBP6.92□□□□□ -1.3
UPF2-203ENST00000397053 CNEP1R1Q8N9A8 125 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 AQP11Q8NBQ7 271 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 S100PBPQ96BU1 408 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 COG8Q96MW5 612 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 HERC2P3Q9BVR0 1158 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 MYNNQ9NPC7 610 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 TMEM100Q9NV29 134 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 MCTS1Q9ULC4 181 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms