RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 SEPHS1P49903 392 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 SLC7A2P52569 658 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 ARSFP54793 590 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 LIM2P55344 173 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 ZFP36L1Q07352 338 aaKnown RBP12.87□□□□□ -0.35
MCF2L-209ENST00000397036 CEACAM7Q14002 265 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 SF3A2Q15428 464 aaKnown RBP12.87□□□□□ -0.35
MCF2L-209ENST00000397036 DEFB110Q30KQ9 67 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 C6orf10Q5SRN2 563 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 TMPRSS9Q7Z410 1059 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 PDSS2Q86YH6 399 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 SLITRK4Q8IW52 837 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 MSRB3Q8IXL7 192 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 TTC29Q8NA56 475 aaPredicted RBP12.87□□□□□ -0.35
MCF2L-209ENST00000397036 ZCCHC10Q8TBK6 192 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 MIEF2Q96C03 454 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 ZBED6CLQ96FA7 236 aaPredicted RBP12.87□□□□□ -0.35
MCF2L-209ENST00000397036 C10orf90Q96M02 699 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 PANX1Q96RD7 426 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 GFM1Q96RP9 751 aaKnown RBP12.87□□□□□ -0.35
MCF2L-209ENST00000397036 MAPKAP1Q9BPZ7 522 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 SLC35C2Q9NQQ7 365 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 CMTM6Q9NX76 183 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 SLC25A37Q9NYZ2 338 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 VAPAQ9P0L0 249 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 ZNF282Q9UDV7 671 aaPredicted RBP12.87□□□□□ -0.35
MCF2L-209ENST00000397036 ATXN7L1Q9ULK2 861 aaPredicted RBP12.87□□□□□ -0.35
MCF2L-209ENST00000397036 PCDHGB4Q9UN71 923 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 ERVK-11Q9UQG0 969 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 MRPS2Q9Y399 296 aaKnown RBP12.87□□□□□ -0.35
MCF2L-209ENST00000397036 NAALAD2Q9Y3Q0 740 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 PCDHB14Q9Y5E9 798 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 SPACA6W5XKT8 324 aa12.87□□□□□ -0.35
MCF2L-209ENST00000397036 ASCC3Q8N3C0 2202 aaKnown RBP12.86□□□□□ -0.35
MCF2L-209ENST00000397036 A0A1W2PRB8 838 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 H0YHG0 523 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 CIB2O75838 187 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 OR2B3O76000 313 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 NR2F6P10588 404 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 FOLR1P15328 257 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 TGM1P22735 817 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 ITGA1P56199 1179 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 SNRPNP63162 240 aaKnown RBP12.86□□□□□ -0.35
MCF2L-209ENST00000397036 ELF3P78545 371 aaPredicted RBP12.86□□□□□ -0.35
MCF2L-209ENST00000397036 E2F1Q01094 437 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 TNFRSF17Q02223 184 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 TRAP1Q12931 704 aaKnown RBP12.86□□□□□ -0.35
MCF2L-209ENST00000397036 TRIM25Q14258 630 aaKnown RBP12.86□□□□□ -0.35
MCF2L-209ENST00000397036 FXNQ16595 210 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 PRSS53Q2L4Q9 553 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 ANKRD26P1Q6NSI1 321 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 DGLUCYQ7Z3D6 616 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 GPR135Q8IZ08 494 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 TRIML2Q8N7C3 387 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 DNAJB14Q8TBM8 379 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 TANKQ92844 425 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 ZNF501Q96CX3 271 aaPredicted RBP12.86□□□□□ -0.35
MCF2L-209ENST00000397036 CLPTM1LQ96KA5 538 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 INPP5KQ9BT40 448 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 EDEM2Q9BV94 578 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 ZMYND15Q9H091 742 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 IL1RL2Q9HB29 575 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 FANCEQ9HB96 536 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 FGF21Q9NSA1 209 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 TAS2R9Q9NYW1 312 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 ADA2Q9NZK5 511 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 SUCOQ9UBS9 1254 aaKnown RBP12.86□□□□□ -0.35
MCF2L-209ENST00000397036 FBXW2Q9UKT8 454 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 L3MBTL1Q9Y468 752 aa12.86□□□□□ -0.35
MCF2L-209ENST00000397036 LAMA1P25391 3075 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 EP300Q09472 2414 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-209ENST00000397036 USP34Q70CQ2 3546 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 PRORSD1PA6NEY8 169 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 MYO1GB0I1T2 1018 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 TMEM150CB9EJG8 249 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 D6RAR5 112 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 CYR61O00622 381 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 NME4O00746 187 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 PGRMC2O15173 223 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 PDPK1O15530 556 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 B3GALT4O96024 378 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 CTSBP07858 339 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 ABCB1P08183 1280 aaPredicted RBP12.85□□□□□ -0.35
MCF2L-209ENST00000397036 IL1RNP18510 177 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 CPN2P22792 545 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 MAGEA8P43361 318 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 AVPR1BP47901 424 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 ALDH9A1P49189 494 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 RAB38P57729 211 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 RIPK1Q13546 671 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 CAPRIN1Q14444 709 aaKnown RBP12.85□□□□□ -0.35
MCF2L-209ENST00000397036 SNAP47Q5SQN1 464 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 C6orf163Q5TEZ5 329 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 OR52E8Q6IFG1 317 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 CYB5D1Q6P9G0 228 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 ANKRD46Q86W74 232 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 HPS6Q86YV9 775 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 NAXDQ8IW45 347 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 C10orf67Q8IYJ2 551 aa12.85□□□□□ -0.35
MCF2L-209ENST00000397036 MMP21Q8N119 569 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms