RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 SLC48A1Q6P1K1 146 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 SLC41A2Q96JW4 573 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 GBP5Q96PP8 586 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 SH3GL1Q99961 368 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 MUC13Q9H3R2 512 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 LYRM4Q9HD34 91 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 SIRT3Q9NTG7 399 aaPredicted RBP12.03□□□□□ -0.48
TRIM39-204ENST00000396548 C5AR2Q9P296 337 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.03□□□□□ -0.48
TRIM39-204ENST00000396548 AP3M1Q9Y2T2 418 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 TCRBV5S2A0A599 114 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 LMNAP02545 664 aaKnown RBP12.03□□□□□ -0.48
TRIM39-204ENST00000396548 IL1RNP18510 177 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 MPLP40238 635 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 LPAL2Q16609 132 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 DEFB134Q4QY38 66 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 PACS2Q86VP3 889 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 PLXDC1Q8IUK5 500 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 D2HGDHQ8N465 521 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 ZNF655Q8N720 491 aaPredicted RBP12.03□□□□□ -0.48
TRIM39-204ENST00000396548 Q8N9G6 341 aaPredicted RBP12.03□□□□□ -0.48
TRIM39-204ENST00000396548 VPS37AQ8NEZ2 397 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 OR4A15Q8NGL6 344 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 SLCO4A1Q96BD0 722 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 ZNF681Q96N22 645 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 KCTD14Q9BQ13 255 aaPredicted RBP12.03□□□□□ -0.48
TRIM39-204ENST00000396548 SMOC1Q9H4F8 434 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 MIEF1Q9NQG6 463 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 ACSS1Q9NUB1 689 aaPredicted RBP12.03□□□□□ -0.48
TRIM39-204ENST00000396548 DAPP1Q9UN19 280 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 PLCL2Q9UPR0 1127 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 SCN3AQ9NY46 2000 aa12.03□□□□□ -0.48
TRIM39-204ENST00000396548 A0A1W2PQM1 296 aa12.02□□□□□ -0.48
TRIM39-204ENST00000396548 A0A1W2PRB8 838 aa12.02□□□□□ -0.48
TRIM39-204ENST00000396548 FAM220BPB1ANY3 271 aa12.02□□□□□ -0.48
TRIM39-204ENST00000396548 ARPC2O15144 300 aa12.02□□□□□ -0.48
TRIM39-204ENST00000396548 FKBP6O75344 327 aa12.02□□□□□ -0.48
TRIM39-204ENST00000396548 CPSF4O95639 269 aaKnown RBP12.02□□□□□ -0.48
TRIM39-204ENST00000396548 SYPP08247 313 aa12.02□□□□□ -0.48
TRIM39-204ENST00000396548 ZNF883P0CG24 379 aa12.02□□□□□ -0.48
TRIM39-204ENST00000396548 CKMT1AP12532 417 aa12.02□□□□□ -0.48
TRIM39-204ENST00000396548 ENGP17813 658 aa12.02□□□□□ -0.48
TRIM39-204ENST00000396548 DUSP2Q05923 314 aa12.02□□□□□ -0.48
TRIM39-204ENST00000396548 BIRC2Q13490 618 aa12.02□□□□□ -0.48
TRIM39-204ENST00000396548 ADRM1Q16186 407 aa12.02□□□□□ -0.48
TRIM39-204ENST00000396548 FAM180BQ6P0A1 224 aa12.02□□□□□ -0.48
TRIM39-204ENST00000396548 SERPINA11Q86U17 422 aa12.02□□□□□ -0.48
TRIM39-204ENST00000396548 EID2Q8N6I1 236 aa12.02□□□□□ -0.48
TRIM39-204ENST00000396548 SUN3Q8TAQ9 357 aa12.02□□□□□ -0.48
TRIM39-204ENST00000396548 ZCCHC10Q8TBK6 192 aa12.02□□□□□ -0.48
TRIM39-204ENST00000396548 ARRDC1-AS1Q9H2J1 176 aa12.02□□□□□ -0.48
TRIM39-204ENST00000396548 TAS2R9Q9NYW1 312 aa12.02□□□□□ -0.48
TRIM39-204ENST00000396548 STX18Q9P2W9 335 aaKnown RBP12.02□□□□□ -0.48
TRIM39-204ENST00000396548 CLIC1O00299 241 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 FOXS1O43638 330 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 GGT1P19440 569 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 EMP3P54852 163 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 TNFRSF17Q02223 184 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 SNCBQ16143 134 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 OR10A6Q8NH74 314 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 OR5P2Q8WZ92 322 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 NUDT22Q9BRQ3 303 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 FAIM2Q9BWQ8 316 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 NPLQ9BXD5 320 aaPredicted RBP12.02□□□□□ -0.49
TRIM39-204ENST00000396548 ZNF768Q9H5H4 540 aaKnown RBP12.02□□□□□ -0.49
TRIM39-204ENST00000396548 CXorf36Q9H7Y0 433 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 ZNF282Q9UDV7 671 aaPredicted RBP12.02□□□□□ -0.49
TRIM39-204ENST00000396548 FBXW2Q9UKT8 454 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 CYR61O00622 381 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 PDPK1O15530 556 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 B4GALT2O60909 372 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 GUCY1B2O75343 617 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 EIF2S1P05198 315 aaKnown RBP12.02□□□□□ -0.49
TRIM39-204ENST00000396548 ERFP50548 548 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 CCDC6Q16204 474 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 IRAK1BP1Q5VVH5 260 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 ZNF621Q6ZSS3 439 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 DHFR2Q86XF0 187 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 CLEC4FQ8N1N0 589 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 CA13Q8N1Q1 262 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 DTWD1Q8N5C7 304 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 OR52E4Q8NGH9 312 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 CNRIP1Q96F85 164 aaPredicted RBP12.02□□□□□ -0.49
TRIM39-204ENST00000396548 AHCYL2Q96HN2 611 aaKnown RBP12.02□□□□□ -0.49
TRIM39-204ENST00000396548 CSF3RQ99062 836 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 PDE7BQ9NP56 450 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 SLC35C2Q9NQQ7 365 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 EGFL7Q9UHF1 273 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 VPS4AQ9UN37 437 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 NAALAD2Q9Y3Q0 740 aa12.02□□□□□ -0.49
TRIM39-204ENST00000396548 A0A1W2PS29 197 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 TXNDC9O14530 226 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 TOX3O15405 576 aaPredicted RBP12.01□□□□□ -0.49
TRIM39-204ENST00000396548 KCNK5O95279 499 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 GCKP35557 465 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 MLLT3P42568 568 aaPredicted RBP12.01□□□□□ -0.49
TRIM39-204ENST00000396548 HSD11B2P80365 405 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 RHDQ02161 417 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 RCN1Q15293 331 aa12.01□□□□□ -0.49
TRIM39-204ENST00000396548 TCEAL6Q6IPX3 200 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms