RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 TBCDQ9BTW9 1192 aa17.04■□□□□ 0.32
FXN-203ENST00000396366 ACSS3Q9H6R3 686 aa17.04■□□□□ 0.32
FXN-203ENST00000396366 LYRM4Q9HD34 91 aa17.04■□□□□ 0.32
FXN-203ENST00000396366 ADAP2Q9NPF8 381 aa17.04■□□□□ 0.32
FXN-203ENST00000396366 ZNF358Q9NW07 568 aa17.04■□□□□ 0.32
FXN-203ENST00000396366 PCNX1Q96RV3 2341 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 ASNA1O43681 348 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 KLHL2O95198 593 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 SIX3O95343 332 aaPredicted RBP17.03■□□□□ 0.32
FXN-203ENST00000396366 GFAPP14136 432 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 HIST1H1TP22492 207 aaPredicted RBP17.03■□□□□ 0.32
FXN-203ENST00000396366 GRNP28799 593 aaKnown RBP17.03■□□□□ 0.32
FXN-203ENST00000396366 TYK2P29597 1187 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 STX4Q12846 297 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 NAA30Q147X3 362 aaPredicted RBP17.03■□□□□ 0.32
FXN-203ENST00000396366 ACAP2Q15057 778 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 ELAVL1Q15717 326 aaKnown RBP17.03■□□□□ 0.32
FXN-203ENST00000396366 WHAMMP3Q1A5X7 153 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 AP5B1Q2VPB7 878 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 TMEM35AQ53FP2 167 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 KRTCAP3Q53RY4 240 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 DEPDC1Q5TB30 811 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 KHDRBS2Q5VWX1 349 aaKnown RBP17.03■□□□□ 0.32
FXN-203ENST00000396366 CHSY3Q70JA7 882 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 MRGPRGQ86SM5 289 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 SPPL2CQ8IUH8 684 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 CHERPQ8IWX8 916 aaKnown RBP17.03■□□□□ 0.32
FXN-203ENST00000396366 MMGT1Q8N4V1 131 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 TMEM156Q8N614 296 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 HUS1BQ8NHY5 278 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 IFT81Q8WYA0 676 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 TMEM125Q96AQ2 219 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 ANKRD9Q96BM1 317 aaPredicted RBP17.03■□□□□ 0.32
FXN-203ENST00000396366 CMTM7Q96FZ5 175 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 MTERF1Q99551 399 aaKnown RBP17.03■□□□□ 0.32
FXN-203ENST00000396366 VPS11Q9H270 941 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 CDC42EP4Q9H3Q1 356 aaKnown RBP17.03■□□□□ 0.32
FXN-203ENST00000396366 CPSF2Q9P2I0 782 aaKnown RBP17.03■□□□□ 0.32
FXN-203ENST00000396366 VTI1BQ9UEU0 232 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 ZNF835Q9Y2P0 537 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 ANGPTL3Q9Y5C1 460 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 CLCA3PQ9Y6N3 262 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 GTF3C1Q12789 2109 aa17.03■□□□□ 0.32
FXN-203ENST00000396366 SYCE1LA8MT33 242 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 PRSS44E7EML9 344 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 WWP2O00308 870 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 CDK2AP1O14519 115 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 KLK8O60259 260 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 OR2J2O76002 312 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 ZFAND5O76080 213 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 ACSL3O95573 720 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 TNNI3P19429 210 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 PHBP35232 272 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 SSR2P43308 183 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 MEOX1P50221 254 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 GPR85P60893 370 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 SLAMF1Q13291 335 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 OR4C11Q6IEV9 310 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 NCCRP1Q6ZVX7 275 aaPredicted RBP17.02■□□□□ 0.32
FXN-203ENST00000396366 FGD2Q7Z6J4 655 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 CYP4Z2PQ8N1L4 340 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 TMEM132CQ8N3T6 1108 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 FAM98AQ8NCA5 519 aaKnown RBP17.02■□□□□ 0.32
FXN-203ENST00000396366 SRFBP1Q8NEF9 429 aaKnown RBP17.02■□□□□ 0.32
FXN-203ENST00000396366 CCDC77Q9BR77 488 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 OR8D2Q9GZM6 311 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 ROGDIQ9GZN7 287 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 ACTR8Q9H981 624 aa17.02■□□□□ 0.32
FXN-203ENST00000396366 ARHGAP10A1A4S6 786 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 WASHC1A8K0Z3 465 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 C17orf105B2RV13 164 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 PEX1O43933 1283 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 PRKRAO75569 313 aaKnown RBP17.01■□□□□ 0.31
FXN-203ENST00000396366 SCELO95171 688 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 ETHE1O95571 254 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 ZNF24P17028 368 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 CPN2P22792 545 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 ECHS1P30084 290 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 PTGER1P34995 402 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 PIK3CGP48736 1102 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 SERPINB8P50452 374 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 SSR4P51571 173 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 NR0B1P51843 470 aaKnown RBP17.01■□□□□ 0.31
FXN-203ENST00000396366 NEK2P51955 445 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 ALDH18A1P54886 795 aaKnown RBP17.01■□□□□ 0.31
FXN-203ENST00000396366 RPS13P62277 151 aaKnown RBP17.01■□□□□ 0.31
FXN-203ENST00000396366 ADORA2A-AS1P86434 159 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 GTF2H2Q13888 395 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 RCN2Q14257 317 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.01■□□□□ 0.31
FXN-203ENST00000396366 C18orf63Q68DL7 685 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 GTF2H2CQ6P1K8 395 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 DGAT2L6Q6ZPD8 337 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 GOLGA7Q7Z5G4 137 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 RELL1Q8IUW5 271 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 MORN4Q8NDC4 146 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 UHMK1Q8TAS1 419 aaKnown RBP17.01■□□□□ 0.31
FXN-203ENST00000396366 DOK4Q8TEW6 326 aa17.01■□□□□ 0.31
FXN-203ENST00000396366 PPWD1Q96BP3 646 aaKnown RBP17.01■□□□□ 0.31
FXN-203ENST00000396366 MAGED4Q96JG8 741 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms