RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 PHPT1Q9NRX4 125 aaPredicted RBP14.6□□□□□ -0.07
UBE2D3-207ENST00000394801 DOCK8Q8NF50 2099 aa14.6□□□□□ -0.07
UBE2D3-207ENST00000394801 PRAMEF33A0A0G2JMD5 474 aa14.6□□□□□ -0.07
UBE2D3-207ENST00000394801 FEZF1A0PJY2 475 aa14.6□□□□□ -0.07
UBE2D3-207ENST00000394801 PRR19A6NJB7 356 aa14.6□□□□□ -0.07
UBE2D3-207ENST00000394801 PRAMEF10O60809 474 aa14.6□□□□□ -0.07
UBE2D3-207ENST00000394801 CYP4F2P78329 520 aa14.6□□□□□ -0.07
UBE2D3-207ENST00000394801 CSNK1G2P78368 415 aa14.6□□□□□ -0.07
UBE2D3-207ENST00000394801 MLLT1Q03111 559 aaPredicted RBP14.6□□□□□ -0.07
UBE2D3-207ENST00000394801 SMN1Q16637 294 aaKnown RBP14.6□□□□□ -0.07
UBE2D3-207ENST00000394801 REEP3Q6NUK4 255 aa14.6□□□□□ -0.07
UBE2D3-207ENST00000394801 ZNF605Q86T29 641 aa14.6□□□□□ -0.07
UBE2D3-207ENST00000394801 RAB42Q8N4Z0 105 aa14.6□□□□□ -0.07
UBE2D3-207ENST00000394801 ZNF540Q8NDQ6 660 aa14.6□□□□□ -0.07
UBE2D3-207ENST00000394801 RGMAQ96B86 450 aa14.6□□□□□ -0.07
UBE2D3-207ENST00000394801 C1QTNF2Q9BXJ5 285 aa14.6□□□□□ -0.07
UBE2D3-207ENST00000394801 DDX31Q9H8H2 851 aaKnown RBP14.6□□□□□ -0.07
UBE2D3-207ENST00000394801 ACER3Q9NUN7 267 aa14.6□□□□□ -0.07
UBE2D3-207ENST00000394801 TAS2R7Q9NYW3 318 aa14.6□□□□□ -0.07
UBE2D3-207ENST00000394801 A0A1W2PP55 124 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 RGS10O43665 173 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 LCMT2O60294 686 aaKnown RBP14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 FOXD2O60548 495 aaPredicted RBP14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 GABARAPO95166 117 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 KRT20P35900 424 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 GGT2P36268 569 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 MANFP55145 182 aaKnown RBP14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 AQP6Q13520 282 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 C9orf50Q5SZB4 431 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 CEACAM20Q6UY09 585 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 UBE3DQ7Z6J8 389 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 NUDT13Q86X67 352 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 CACUL1Q86Y37 369 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 SVOPQ8N4V2 548 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 PSMA8Q8TAA3 256 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 FAM131CQ96AQ9 280 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 FERD3LQ96RJ6 166 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 PIP5K1AQ99755 562 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 RMI1Q9H9A7 625 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 A4GALTQ9NPC4 353 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 PLCXD1Q9NUJ7 323 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 TBC1D23Q9NUY8 699 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 POFUT2Q9Y2G5 429 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 YBX2Q9Y2T7 364 aaKnown RBP14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 PCDHGA2Q9Y5H1 932 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 PLXND1Q9Y4D7 1925 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 DOCK9Q9BZ29 2069 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 PDPK1O15530 556 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 KCNJ13O60928 360 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 CLEC3AO75596 197 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 RECKO95980 971 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 MASP1P48740 699 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 RAB28P51157 221 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 CDH12P55289 794 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 TRA2BP62995 288 aaKnown RBP14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 SPIBQ01892 262 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 MLC1Q15049 377 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 ZNF513Q8N8E2 541 aaPredicted RBP14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 OR2A1Q8NGT9 310 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 APOBEC4Q8WW27 367 aaKnown RBP14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 BORCS5Q969J3 196 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 YIPF6Q96EC8 236 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 C12orf66Q96MD2 445 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 CAMK1GQ96NX5 476 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 ABCG4Q9H172 646 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 RASSF1Q9NS23 344 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 RAB23Q9ULC3 237 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 RNF6Q9Y252 685 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 SNX8Q9Y5X2 465 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 ENPP4Q9Y6X5 453 aa14.59□□□□□ -0.07
UBE2D3-207ENST00000394801 IGKV1-8A0A0C4DH67 115 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 NDUFS4O43181 175 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 OR1F1O43749 312 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 TMPRSS11DO60235 418 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 MT-ND2P03891 347 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 ACP5P13686 325 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 PORP16435 677 aaPredicted RBP14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 RHCEP18577 417 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 RPS21P63220 83 aaKnown RBP14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 TEKQ02763 1124 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 SPCS2Q15005 226 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 EXOC3L2Q2M3D2 409 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 ITPRIPL2Q3MIP1 535 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 GPR153Q6NV75 609 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 FAM180BQ6P0A1 224 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 LGI4Q8N135 537 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 HORMAD2Q8N7B1 307 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 RHOXF1Q8NHV9 184 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 CREB3L4Q8TEY5 395 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 ELSPBP1Q96BH3 223 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 KCNC2Q96PR1 638 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 BTBD1Q9H0C5 482 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 ACOT13Q9NPJ3 140 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 SIRT3Q9NTG7 399 aaPredicted RBP14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 ACSS1Q9NUB1 689 aaPredicted RBP14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 RLIMQ9NVW2 624 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 PAIP2BQ9ULR5 123 aaKnown RBP14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 SLC17A4Q9Y2C5 497 aa14.58□□□□□ -0.08
UBE2D3-207ENST00000394801 HEATR5BQ9P2D3 2071 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms