RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 hCG_1807616A0A1W2PRN6 198 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 ALDH1A1P00352 501 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 ADRA2AP08913 450 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 FOSL1P15407 271 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 CDKN1CP49918 316 aaPredicted RBP18.05■□□□□ 0.48
HOXC6-202ENST00000394331 ABRAXAS2Q15018 415 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 VMACQ2NL98 169 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 PSAPL1Q6NUJ1 521 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 CFAP77Q6ZQR2 320 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 MSANTD1Q6ZTZ1 278 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 DGLUCYQ7Z3D6 616 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 GLCCI1Q86VQ1 547 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 SLC44A2Q8IWA5 706 aaPredicted RBP18.05■□□□□ 0.48
HOXC6-202ENST00000394331 SIDT2Q8NBJ9 832 aaKnown RBP18.05■□□□□ 0.48
HOXC6-202ENST00000394331 PLD4Q96BZ4 506 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 LINGO1Q96FE5 620 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 CASD1Q96PB1 797 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 CD274Q9NZQ7 290 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 PADI2Q9Y2J8 665 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 PCDHGC4Q9Y5F7 938 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 VWA8A3KMH1 1905 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 ZNF98A6NK75 572 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 CBX4O00257 560 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 SLC28A1O00337 649 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 TPST2O60704 377 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 NIPSNAP2O75323 286 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 PCSK2P16519 638 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 SDC2P34741 201 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 ZRANB3Q5FWF4 1079 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 HECTD3Q5T447 861 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 VTCN1Q7Z7D3 282 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 LIX1Q8N485 282 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 OVCA2Q8WZ82 227 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 ZNF416Q9BWM5 594 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 KCNMB2Q9Y691 235 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 C7orf66A4D0T2 115 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 KRBOX1C9JBD0 128 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 F11P03951 625 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 OR56A5P0C7T3 313 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 HK3P52790 923 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 FLI1Q01543 452 aaPredicted RBP18.05■□□□□ 0.48
HOXC6-202ENST00000394331 ALDH6A1Q02252 535 aaKnown RBP18.05■□□□□ 0.48
HOXC6-202ENST00000394331 SCRN3Q0VDG4 424 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 MEDAGQ5VYS4 303 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 RETSATQ6NUM9 610 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 ZNF551Q7Z340 670 aaPredicted RBP18.05■□□□□ 0.48
HOXC6-202ENST00000394331 SLC34A3Q8N130 599 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 TMEM145Q8NBT3 493 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 OR9Q1Q8NGQ5 310 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 CD200R1Q8TD46 325 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 EEF1AKMT1Q8WVE0 214 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 AHCYL2Q96HN2 611 aaKnown RBP18.05■□□□□ 0.48
HOXC6-202ENST00000394331 CDK15Q96Q40 435 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 RBP7Q96R05 134 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 MCCC2Q9HCC0 563 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 NUDT4Q9NZJ9 180 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 ENOPH1Q9UHY7 261 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 TMCC3Q9ULS5 477 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 NCKAP1Q9Y2A7 1128 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 ASB4Q9Y574 426 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 ASB1Q9Y576 335 aa18.05■□□□□ 0.48
HOXC6-202ENST00000394331 H7C0S8 307 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 CDRT1O95170 752 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 PTGER3P43115 390 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 HNRNPA0Q13151 305 aaKnown RBP18.04■□□□□ 0.48
HOXC6-202ENST00000394331 COL19A1Q14993 1142 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 CTSL3PQ5NE16 218 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 RTL4Q6ZR62 310 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 STK40Q8N2I9 435 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 FEVQ99581 238 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 CWH43Q9H720 699 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 MAB21L2Q9Y586 359 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 OR1I1O60431 355 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 CCNB2O95067 398 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 GJB5O95377 273 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 PRAMEF1O95521 474 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 ANXA3P12429 323 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 CKMT1AP12532 417 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 NUP62P37198 522 aaPredicted RBP18.04■□□□□ 0.48
HOXC6-202ENST00000394331 MLLT11Q13015 90 aaPredicted RBP18.04■□□□□ 0.48
HOXC6-202ENST00000394331 MICAQ29983 383 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 TRILQ7L0X0 811 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 TIGD4Q8IY51 512 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 WDR48Q8TAF3 677 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 MED28Q9H204 178 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 SLC28A3Q9HAS3 691 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 FZD3Q9NPG1 666 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 RDH8Q9NYR8 311 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 SESN1Q9Y6P5 492 aa18.04■□□□□ 0.48
HOXC6-202ENST00000394331 ZNF840PA6NDX5 716 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 KPNA5O15131 536 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 ADAMDEC1O15204 470 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 OTCP00480 354 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 EPHA5P54756 1037 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 CDC42P60953 191 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 SPHARQ15513 63 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 PLA2G15Q8NCC3 412 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 GFM1Q96RP9 751 aaKnown RBP18.03■□□□□ 0.48
HOXC6-202ENST00000394331 PRR14Q9BWN1 585 aa18.03■□□□□ 0.48
HOXC6-202ENST00000394331 REG4Q9BYZ8 158 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms