RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 CEACAM20Q6UY09 585 aa14.32□□□□□ -0.12
GPC3-202ENST00000394299 TDHQ8IZJ6 230 aa14.32□□□□□ -0.12
GPC3-202ENST00000394299 LCN9Q8WX39 176 aa14.32□□□□□ -0.12
GPC3-202ENST00000394299 SPATA9Q9BWV2 254 aa14.32□□□□□ -0.12
GPC3-202ENST00000394299 NLNQ9BYT8 704 aa14.32□□□□□ -0.12
GPC3-202ENST00000394299 TCEAL2Q9H3H9 227 aaPredicted RBP14.32□□□□□ -0.12
GPC3-202ENST00000394299 SIRT3Q9NTG7 399 aaPredicted RBP14.32□□□□□ -0.12
GPC3-202ENST00000394299 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.32□□□□□ -0.12
GPC3-202ENST00000394299 SH3GLB1Q9Y371 365 aa14.32□□□□□ -0.12
GPC3-202ENST00000394299 A0A0A6YYD5 115 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 TRBC2A0A5B9 178 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 CLEC3AO75596 197 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 C8orf89P0DMQ9 161 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 FPR1P21462 350 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 SLAMF1Q13291 335 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 TEAD4Q15561 434 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 ZIC1Q15915 447 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 DUSP7Q16829 419 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 C6orf141Q5SZD1 244 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 LAIR1Q6GTX8 287 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 Q6ZPB1 254 aaPredicted RBP14.31□□□□□ -0.12
GPC3-202ENST00000394299 USP30Q70CQ3 517 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 SZRD1Q7Z422 152 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 AMIGO1Q86WK6 493 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 EGFL6Q8IUX8 553 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 SHISA5Q8N114 240 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 PIK3C3Q8NEB9 887 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 MS4A6EQ96DS6 147 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 WDR92Q96MX6 357 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 REEP1Q9H902 201 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 APOBEC3BQ9UH17 382 aaKnown RBP14.31□□□□□ -0.12
GPC3-202ENST00000394299 FBXW2Q9UKT8 454 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 CDC14AQ9UNH5 594 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 ATG4BQ9Y4P1 393 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 COMMD3-BMI1R4GMX3 469 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 SCN3AQ9NY46 2000 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 NME6O75414 186 aaPredicted RBP14.31□□□□□ -0.12
GPC3-202ENST00000394299 CHRM5P08912 532 aaPredicted RBP14.31□□□□□ -0.12
GPC3-202ENST00000394299 CRHBPP24387 322 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 HLCSP50747 726 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 ARHGDIAP52565 204 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 ITGA1P56199 1179 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 DSTNP60981 165 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 MRPS21P82921 87 aaKnown RBP14.31□□□□□ -0.12
GPC3-202ENST00000394299 DUSP2Q05923 314 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 C18orf63Q68DL7 685 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 KDM4DQ6B0I6 523 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 LPCAT2Q7L5N7 544 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 PIWIL3Q7Z3Z3 882 aaKnown RBP14.31□□□□□ -0.12
GPC3-202ENST00000394299 C6orf120Q7Z4R8 191 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 CLVS1Q8IUQ0 354 aaPredicted RBP14.31□□□□□ -0.12
GPC3-202ENST00000394299 ATG16L2Q8NAA4 619 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 KCT2Q8NC54 265 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 OR5P2Q8WZ92 322 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 RDH12Q96NR8 316 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 NAA50Q9GZZ1 169 aaKnown RBP14.31□□□□□ -0.12
GPC3-202ENST00000394299 TMEM38AQ9H6F2 299 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 C6orf106Q9H6K1 298 aaPredicted RBP14.31□□□□□ -0.12
GPC3-202ENST00000394299 PRDM7Q9NQW5 492 aa14.31□□□□□ -0.12
GPC3-202ENST00000394299 TUBA8Q9NY65 449 aaPredicted RBP14.31□□□□□ -0.12
GPC3-202ENST00000394299 PTGES3LE9PB15 166 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 TMX2-CTNND1H3BSU7 103 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 XPNPEP2O43895 674 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 ERAL1O75616 437 aaKnown RBP14.3□□□□□ -0.12
GPC3-202ENST00000394299 HNRNPA2B1P22626 353 aaKnown RBP14.3□□□□□ -0.12
GPC3-202ENST00000394299 MAPK10P53779 464 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 FADDQ13158 208 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 LSAMPQ13449 338 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 TP53BP2Q13625 1128 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 TOR1AIP1Q5JTV8 583 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 ZNF691Q5VV52 312 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 HMGN2P46Q86SG4 172 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 ADAMTS16Q8TE57 1224 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 SLC38A5Q8WUX1 472 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 GLIPR2Q9H4G4 154 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 SERHL2Q9H4I8 314 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 ANKRA2Q9H9E1 313 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 RLIMQ9NVW2 624 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 RHCGQ9UBD6 479 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 SCML1Q9UN30 329 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 SLCO1B1Q9Y6L6 691 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 MDC1Q14676 2089 aaKnown RBP14.3□□□□□ -0.12
GPC3-202ENST00000394299 ARHGEF17Q96PE2 2063 aaPredicted RBP14.3□□□□□ -0.12
GPC3-202ENST00000394299 A0A1W2PR48 441 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 BCKDKO14874 412 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 KRT75O95678 551 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 BCHEP06276 602 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 ARAFP10398 606 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 CERS1P27544 350 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 GRK3P35626 688 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 GSSP48637 474 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 RAD23AP54725 363 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 KIAA1024LP59773 190 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 IL5RAQ01344 420 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 RAB39AQ14964 217 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 ALG11Q2TAA5 492 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 SPDYE7PQ495Y7 208 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 BORAQ6PGQ7 559 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 B3GNT6Q6ZMB0 384 aa14.3□□□□□ -0.12
GPC3-202ENST00000394299 Q6ZSR6 202 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms