RNA–Protein interactions for RNA: ENST00000393243.5

GSE1-202, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-202ENST00000393243 ISOC1Q96CN7 298 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 C7orf50Q9BRJ6 194 aaKnown RBP12.91□□□□□ -0.34
GSE1-202ENST00000393243 SCP2D1Q9UJQ7 156 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 hCG_1807616A0A1W2PRN6 198 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 A6NLC8 198 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 NPIPA2E9PIF3 369 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 F5H0A9 414 aaPredicted RBP12.91□□□□□ -0.34
GSE1-202ENST00000393243 NPIPA3F8WFD2 350 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 CHRNA1P02708 482 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 HSD17B2P37059 387 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 GPR4P46093 362 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 EXOC3L2Q2M3D2 409 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 MS4A13Q5J8X5 152 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 A0A1W2PP18 115 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 LRRN3E7EW58 273 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 ZNF678Q5SXM1 525 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 TXNDC5Q8NBS9 432 aaKnown RBP12.91□□□□□ -0.34
GSE1-202ENST00000393243 LRRN3Q9H3W5 708 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 POU2F3Q9UKI9 436 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 PEPDP12955 493 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 STK19P49842 368 aaPredicted RBP12.91□□□□□ -0.34
GSE1-202ENST00000393243 RAB4BP61018 213 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 ITPRIPL2Q3MIP1 535 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 TMPRSS12Q86WS5 348 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 OR4N5Q8IXE1 308 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 OR9A1PQ8NGU1 263 aa12.91□□□□□ -0.34
GSE1-202ENST00000393243 ABCB7O75027 752 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 PAK4O96013 591 aaPredicted RBP12.9□□□□□ -0.34
GSE1-202ENST00000393243 ETV3P41162 512 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 ASRGL1Q7L266 308 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 C14orf80Q86SX3 495 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 OSTM1Q86WC4 334 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 C12orf40Q86WS4 652 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 NECAB3Q96P71 396 aaPredicted RBP12.9□□□□□ -0.34
GSE1-202ENST00000393243 MAPKAP1Q9BPZ7 522 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 TMEM121BQ9BXQ6 578 aaPredicted RBP12.9□□□□□ -0.34
GSE1-202ENST00000393243 EEF1E1-BLOC1S5C9J1V9 151 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 ZXDBP98169 803 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 PTGR1Q14914 329 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 SPRYD7Q5W111 196 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 EIF5AL1Q6IS14 154 aaKnown RBP12.9□□□□□ -0.34
GSE1-202ENST00000393243 KLBQ86Z14 1044 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 NPLOC4Q8TAT6 608 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 PNPLA2Q96AD5 504 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 PEBP4Q96S96 227 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 PHOX2BQ99453 314 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 GLS2Q9UI32 602 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 LRRC42Q9Y546 428 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 PCDHGB2Q9Y5G2 931 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 TEX264Q9Y6I9 313 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 AP1M2Q9Y6Q5 423 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 SLITRK5O94991 958 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 AGR2O95994 175 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 TNFRSF1BP20333 461 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 ZNF616Q08AN1 781 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 ZNF584Q8IVC4 421 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 DNAJB8Q8NHS0 232 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 KLHL15Q96M94 604 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 HRASLS2Q9NWW9 162 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 EPHA6Q9UF33 1036 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 KIAA1210Q9ULL0 1709 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 RAD1O60671 282 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 RBMXP38159 391 aaKnown RBP12.9□□□□□ -0.34
GSE1-202ENST00000393243 SLC25A11Q02978 314 aaKnown RBP12.9□□□□□ -0.34
GSE1-202ENST00000393243 TMEM115Q12893 351 aaPredicted RBP12.9□□□□□ -0.34
GSE1-202ENST00000393243 COL28A1Q2UY09 1125 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 REM2Q8IYK8 340 aaPredicted RBP12.9□□□□□ -0.34
GSE1-202ENST00000393243 RIT1Q92963 219 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 ZNF514Q96K75 400 aaPredicted RBP12.9□□□□□ -0.34
GSE1-202ENST00000393243 TGM7Q96PF1 710 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 HDHD5Q9BXW7 423 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 CYP8B1Q9UNU6 501 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 MAB21L2Q9Y586 359 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 GRXCR2A6NFK2 248 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 SLC22A2O15244 555 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 BATFQ16520 125 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 ASTE1Q2TB18 679 aaPredicted RBP12.9□□□□□ -0.34
GSE1-202ENST00000393243 FBXO43Q4G163 708 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 FIGNL1Q6PIW4 674 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 DCDC5Q6ZRR9 648 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 ERMP1Q7Z2K6 904 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.9□□□□□ -0.348e-12■■■□□ 18.1
GSE1-202ENST00000393243 OR51B6Q9H340 312 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 ACSL6Q9UKU0 697 aa12.9□□□□□ -0.34
GSE1-202ENST00000393243 H7C2Y5 167 aa12.89□□□□□ -0.35
GSE1-202ENST00000393243 YY2O15391 372 aa12.89□□□□□ -0.35
GSE1-202ENST00000393243 GRID2O43424 1007 aa12.89□□□□□ -0.35
GSE1-202ENST00000393243 SNHG28P0DPA3 235 aa12.89□□□□□ -0.35
GSE1-202ENST00000393243 ZNF35P13682 527 aa12.89□□□□□ -0.35
GSE1-202ENST00000393243 FPR1P21462 350 aa12.89□□□□□ -0.35
GSE1-202ENST00000393243 CRHR2Q13324 411 aa12.89□□□□□ -0.35
GSE1-202ENST00000393243 FAM86B1Q8N7N1 296 aa12.89□□□□□ -0.35
GSE1-202ENST00000393243 SMPDL3AQ92484 453 aa12.89□□□□□ -0.35
GSE1-202ENST00000393243 IL17FQ96PD4 163 aa12.89□□□□□ -0.35
GSE1-202ENST00000393243 SAV1Q9H4B6 383 aaPredicted RBP12.89□□□□□ -0.35
GSE1-202ENST00000393243 DNMT3AQ9Y6K1 912 aaPredicted RBP12.89□□□□□ -0.35
GSE1-202ENST00000393243 EDDM13A0A1B0GTR0 161 aa12.89□□□□□ -0.35
GSE1-202ENST00000393243 DFNA5O60443 496 aa12.89□□□□□ -0.35
GSE1-202ENST00000393243 AK4P27144 223 aaPredicted RBP12.89□□□□□ -0.35
GSE1-202ENST00000393243 SLAMF1Q13291 335 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms