RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 CDH11P55287 796 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 PDZK1Q5T2W1 519 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 PRAMEF17Q5VTA0 474 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 LRRC8BQ6P9F7 803 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 PRSS55Q6UWB4 352 aaPredicted RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 VRK2Q86Y07 508 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 LAX1Q8IWV1 398 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 RHEBL1Q8TAI7 183 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 CAPSLQ8WWF8 208 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 ALG14Q96F25 216 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 MAGEF1Q9HAY2 307 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 NTMQ9P121 344 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 UTS2RQ9UKP6 389 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 RPH3ALQ9UNE2 315 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 SLC22A14Q9Y267 594 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 KIAA0556O60303 1618 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 FAM240BA0A1B0GVZ2 78 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 SLC30A4O14863 429 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 CALUO43852 315 aaPredicted RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 ECE2O60344 883 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 PRKRAO75569 313 aaKnown RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 OR2J3O76001 311 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 MCF2P10911 925 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 TACR3P29371 465 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 MAT2AP31153 395 aaKnown RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 SLC1A4P43007 532 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 LEPRP48357 1165 aaKnown RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 GAGE13Q4V321 117 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 THOC7Q6I9Y2 204 aaKnown RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 METTL2BQ6P1Q9 378 aaKnown RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 CCDC121Q6ZUS5 278 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 NLRX1Q86UT6 975 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 TRIM69Q86WT6 500 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 SPATA6LQ8N4H0 392 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 TCEANCQ8N8B7 351 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 FAM47BQ8NA70 645 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 KBTBD8Q8NFY9 601 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 OR13C5Q8NGS8 318 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 KIFAP3Q92845 792 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 RPL3LQ92901 407 aaKnown RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 METTL2AQ96IZ6 378 aaKnown RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 MTERF1Q99551 399 aaKnown RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 SLC29A1Q99808 456 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 HDHD2Q9H0R4 259 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 CATSPERBQ9H7T0 1116 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 Q9N2J8 555 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 MTMR10Q9NXD2 777 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 SLCO1C1Q9NYB5 712 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 SLCO1B1Q9Y6L6 691 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 KIF14Q15058 1648 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 TMEM129A0AVI4 362 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 SMIM23A6NLE4 172 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 WASH3PC4AMC7 463 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 YY2O15391 372 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 POU2F1P14859 743 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 UGT2B10P36537 528 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 RPS5P46782 204 aaKnown RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 CDH12P55289 794 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 GNA13Q14344 377 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 GK2Q14410 553 aaPredicted RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 USF2Q15853 346 aaPredicted RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 XKR7Q5GH72 579 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 LIN9Q5TKA1 542 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 IRAK1BP1Q5VVH5 260 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 SLC27A1Q6PCB7 646 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 WASH2PQ6VEQ5 465 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 MDGA2Q7Z553 956 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 ZNF547Q8IVP9 402 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 MAP7D3Q8IWC1 876 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 SELENOHQ8IZQ5 122 aaKnown RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 GBGT1Q8N5D6 347 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 TXNDC5Q8NBS9 432 aaKnown RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 CNIH3Q8TBE1 160 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 ZNF583Q96ND8 569 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 SEPT5Q99719 369 aaPredicted RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 LMF2Q9BU23 707 aaKnown RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 AMBRA1Q9C0C7 1298 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 ZSCAN16Q9H4T2 348 aaPredicted RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 ZNF275Q9NSD4 429 aaPredicted RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 SENP1Q9P0U3 644 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 CRLS1Q9UJA2 301 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 MAP3K19Q56UN5 1328 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 PHLPP2Q6ZVD8 1323 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 CCDC144AA2RUR9 1427 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 A0A1W2PQM1 296 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 ANKDD1BA6NHY2 528 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 NPIPA2E9PIF3 369 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 EIF3HO15372 352 aaKnown RBP eCLIP3.36□□□□□ -1.87
XRN1-202ENST00000392981 TIMM8AO60220 97 aaPredicted RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 LDB3O75112 727 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 SMIM24O75264 130 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 NXPH3O95157 252 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 CELA2BP08218 269 aaPredicted RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 KRT16P08779 473 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 HIST1H2AGP0C0S8 130 aaPredicted RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 BMP7P18075 431 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 GJB2P29033 226 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 FCGR2BP31994 310 aaPredicted RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 GPR12P47775 334 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 SCNN1GP51170 649 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms