RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 PCDHB3Q9Y5E6 796 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 TUBGCP6Q96RT7 1819 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 BRWD1Q9NSI6 2320 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 SCAMP2O15127 329 aaKnown RBP12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 CERS1P27544 350 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 FLYWCH1Q4VC44 716 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 LCTLQ6UWM7 567 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 OR52E4Q8NGH9 312 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 BIRC8Q96P09 236 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 NODALQ96S42 347 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 METTL7AQ9H8H3 244 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 ELL3Q9HB65 397 aaPredicted RBP12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 SLC35C2Q9NQQ7 365 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 FER1L6Q2WGJ9 1857 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 EMC8O43402 210 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 EEDO75530 441 aaKnown RBP12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 PORP16435 677 aaPredicted RBP12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 MC1RQ01726 317 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 RPE65Q16518 533 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 BHLHA9Q7RTU4 235 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 OR4K17Q8NGC6 315 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 MCHR1Q99705 422 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 NTMT1Q9BV86 223 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 PELI2Q9HAT8 420 aa12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 PTBP2Q9UKA9 531 aaKnown RBP12.53□□□□□ -0.4
PTPRN2-202ENST00000389416 MYO10Q9HD67 2058 aa12.52□□□□□ -0.4
PTPRN2-202ENST00000389416 SOX14O95416 240 aa12.52□□□□□ -0.4
PTPRN2-202ENST00000389416 CH25HO95992 272 aa12.52□□□□□ -0.4
PTPRN2-202ENST00000389416 PTGER1P34995 402 aa12.52□□□□□ -0.4
PTPRN2-202ENST00000389416 CAMK1Q14012 370 aa12.52□□□□□ -0.4
PTPRN2-202ENST00000389416 KIR2DS3Q14952 304 aa12.52□□□□□ -0.4
PTPRN2-202ENST00000389416 ARHGAP19Q14CB8 494 aa12.52□□□□□ -0.4
PTPRN2-202ENST00000389416 NSDHLQ15738 373 aa12.52□□□□□ -0.4
PTPRN2-202ENST00000389416 NIPAL1Q6NVV3 410 aa12.52□□□□□ -0.4
PTPRN2-202ENST00000389416 ERMP1Q7Z2K6 904 aa12.52□□□□□ -0.4
PTPRN2-202ENST00000389416 SNX33Q8WV41 574 aa12.52□□□□□ -0.4
PTPRN2-202ENST00000389416 FOXQ1Q9C009 403 aa12.52□□□□□ -0.4
PTPRN2-202ENST00000389416 LRIT1Q9P2V4 623 aa12.52□□□□□ -0.4
PTPRN2-202ENST00000389416 SSR3Q9UNL2 185 aa12.52□□□□□ -0.4
PTPRN2-202ENST00000389416 CAB39Q9Y376 341 aaPredicted RBP12.52□□□□□ -0.4
PTPRN2-202ENST00000389416 SCN4AP35499 1836 aa12.52□□□□□ -0.4
PTPRN2-202ENST00000389416 C17orf113A0A1B0GUU1 675 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 H0Y8X5 98 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 UGDHO60701 494 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 SDC1P18827 310 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 ST3GAL3Q11203 375 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 MRPL28Q13084 256 aaKnown RBP12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 FIGNL1Q6PIW4 674 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 FBXO27Q8NI29 283 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 IPCEF1Q8WWN9 437 aaPredicted RBP12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 ALPK1Q96QP1 1244 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 RPP25Q9BUL9 199 aaKnown RBP12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 OR51I1Q9H343 314 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 DMRT3Q9NQL9 472 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 MBNL1Q9NR56 388 aaKnown RBP12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 A0A0A6YYC8 382 aaPredicted RBP12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 I3L1I5 382 aaPredicted RBP12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 OR5F1O95221 314 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 NUDT1P36639 197 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 CASRP41180 1078 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 NKX3-2P78367 333 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 FADDQ13158 208 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 TCTN1Q2MV58 587 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 PAGE3Q5JUK9 113 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 TRIQKQ629K1 86 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 SNRNP27Q8WVK2 155 aaKnown RBP12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 SLC45A3Q96JT2 553 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 MKRN2Q9H000 416 aaKnown RBP12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 FPR1P21462 350 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 FMO3P31513 532 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 RANBP1P43487 201 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 YPEL5P62699 121 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 PRDX1Q06830 199 aaKnown RBP12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 SGCBQ16585 318 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 TCTE1Q5JU00 501 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 AFMIDQ63HM1 303 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 ZNF57Q68EA5 555 aaPredicted RBP12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 B3GNT6Q6ZMB0 384 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 MINDY1Q8N5J2 469 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 MAL2Q969L2 176 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 DEFB126Q9BYW3 111 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 PRODH2Q9UF12 536 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 MCM8Q9UJA3 840 aa12.52□□□□□ -0.41
PTPRN2-202ENST00000389416 IMPA1P29218 277 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 MAZP56270 477 aaKnown RBP12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 ASTLQ6HA08 431 aaPredicted RBP12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 TMPRSS11AQ6ZMR5 421 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 CLEC14AQ86T13 490 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 OAFQ86UD1 273 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 FAM160A2Q8N612 972 aaPredicted RBP12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 AQP11Q8NBQ7 271 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 OR13H1Q8NG92 308 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 OLIG1Q8TAK6 271 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 HCAR2Q8TDS4 363 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 KIAA1143Q96AT1 154 aaPredicted RBP12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 GFM1Q96RP9 751 aaKnown RBP12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 SMURF2Q9HAU4 748 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 DLEC1Q9Y238 1755 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 DCDC1P59894 354 aa12.51□□□□□ -0.41
PTPRN2-202ENST00000389416 TAP2Q03519 686 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms