RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 DEFB103AP81534 67 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 GOLGA8FQ08AF8 430 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 MADCAM1Q13477 382 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 THOC5Q13769 683 aaKnown RBP-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 TFDP1Q14186 410 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 TMEM132DQ14C87 1099 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 CLEC12BQ2HXU8 276 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZNF789Q5FWF6 425 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 KLF17Q5JT82 389 aaPredicted RBP-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 OR52W1Q6IF63 320 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 C2orf66Q6UXQ4 117 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 DLEU7Q6UYE1 221 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 LEKR1Q6ZMV7 388 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 LINC00322Q6ZN03 302 aaPredicted RBP-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 FP248Q71RG6 208 aaPredicted RBP-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 NUFIP2Q7Z417 695 aaKnown RBP-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 PRSS42Q7Z5A4 293 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 R3HCC1LQ7Z5L2 792 aaKnown RBP-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 LDB1Q86U70 411 aaPredicted RBP-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 FAM160B2Q86V87 743 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 LRRTM4Q86VH4 590 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 THOC6Q86W42 341 aaKnown RBP-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 GCSAMQ8N6F7 178 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 NPEPL1Q8NDH3 523 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 OR6X1Q8NH79 312 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 BLOC1S5Q8TDH9 187 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 PHLDA1Q8WV24 401 aaPredicted RBP-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 RFFLQ8WZ73 363 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 SLC7A6Q92536 515 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 HDAC2Q92769 488 aaKnown RBP-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 MTMR8Q96EF0 704 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 TIMM17AQ99595 171 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 PCGF1Q9BSM1 259 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 AGXT2Q9BYV1 514 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 OR2B2Q9GZK3 357 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 BRD8Q9H0E9 1235 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 TMEM222Q9H0R3 208 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 DNTTIP1Q9H147 329 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 SMYD3Q9H7B4 428 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZNF442Q9H7R0 627 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 TBC1D17Q9HA65 648 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 UBN1Q9NPG3 1134 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 SLC25A10Q9UBX3 287 aaPredicted RBP-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 GGA2Q9UJY4 613 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZNF346Q9UL40 294 aaKnown RBP-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 L1RE1Q9UN81 338 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 SATB2Q9UPW6 733 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 PLXNA4Q9HCM2 1894 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 MROH7-TTC4A0A0A0MT08 1334 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 F5P12259 2224 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 EXPH5Q8NEV8 1989 aa-1.23□□□□□ -2.61
RNU6-540P-201ENST00000384622 ADGRL1O94910 1474 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 A0A0U1RQG5 324 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 A0A1B0GWJ7 208 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 C19orf71A6NCJ1 209 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 NKX2-6A6NCS4 301 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 PABPN1LA6NDY0 278 aaKnown RBP-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 FAM90A18PA6NE21 464 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 FAM90A16PA6NEW6 464 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 EIF4E1BA6NMX2 242 aaKnown RBP-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 FAM90A9PA6NNJ1 464 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 FAM90A5PA8MXJ8 464 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 TEX28O15482 410 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZBTB43O43298 467 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 SPRY1O43609 319 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 CLN5O75503 358 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 RAB36O95755 333 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 FYNP06241 537 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 CYP21A2P08686 494 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 RHOXF2BP0C7M4 288 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 FAM90A15PP0C7V4 464 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 FAM90A14PP0C7W9 464 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 CRYGAP11844 174 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 RNASE3P12724 160 aaKnown RBP-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 MYOGP15173 224 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 MUC1P15941 1255 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZNF182P17025 639 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 AADACP22760 399 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 CCNCP24863 283 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 PNPLA4P41247 253 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 GPD2P43304 727 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 SLCO1A2P46721 670 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 EVX1P49640 407 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 GALCP54803 685 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 ADARP55265 1226 aaKnown RBP-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 DAZ2Q13117 558 aaKnown RBP-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 MSLNQ13421 630 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 BIRC3Q13489 604 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 PDE1CQ14123 709 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 POLD3Q15054 466 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 KLHDC7AQ5VTJ3 777 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 COX6B2Q6YFQ2 88 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 SPNS3Q6ZMD2 512 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 OVCH2Q7RTZ1 564 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 TDRPQ86YL5 185 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 CALHM1Q8IU99 346 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 PSTKQ8IV42 348 aaKnown RBP-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 DND1Q8IYX4 353 aaKnown RBP-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZNF619Q8N2I2 560 aa-1.24□□□□□ -2.61
RNU6-540P-201ENST00000384622 FSIP1Q8NA03 581 aa-1.24□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms