RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 KLHL31Q9H511 634 aa12.88□□□□□ -0.35
SEC13-203ENST00000383801 NTN4Q9HB63 628 aa12.88□□□□□ -0.35
SEC13-203ENST00000383801 GIMAP4Q9NUV9 329 aa12.88□□□□□ -0.35
SEC13-203ENST00000383801 GPATCH2Q9NW75 528 aa12.88□□□□□ -0.35
SEC13-203ENST00000383801 USE1Q9NZ43 259 aa12.88□□□□□ -0.35
SEC13-203ENST00000383801 IFT80Q9P2H3 777 aaPredicted RBP12.88□□□□□ -0.35
SEC13-203ENST00000383801 XIRP2A4UGR9 3374 aa12.88□□□□□ -0.35
SEC13-203ENST00000383801 TRBV23OR9-2A0A075B6M9 112 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 LILRA5A6NI73 299 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 MYO1GB0I1T2 1018 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 G3V2T6 193 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 UPK1AO00322 258 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 AXIN1O15169 862 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 MAP3K13O43283 966 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 SUV39H1O43463 412 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 TNFAIP8O95379 198 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 SEMG1P04279 462 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 NTRK1P04629 796 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 IFI6P09912 130 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 ARAFP10398 606 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 ZNF23P17027 643 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 MAGP20916 626 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 MPIP34949 423 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 SOX11P35716 441 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 BUD31P41223 144 aaPredicted RBP12.87□□□□□ -0.35
SEC13-203ENST00000383801 ALDH9A1P49189 494 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 ALDH3A2P51648 485 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 SELENOWP63302 87 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 RPL6Q02878 288 aaKnown RBP12.87□□□□□ -0.35
SEC13-203ENST00000383801 MERTKQ12866 999 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 RFX4Q33E94 735 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 WDR45BQ5MNZ6 344 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.87□□□□□ -0.35
SEC13-203ENST00000383801 FCRL6Q6DN72 434 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 SLC48A1Q6P1K1 146 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 OGFOD3Q6PK18 319 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 UGT2A3Q6UWM9 527 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 EPHX4Q8IUS5 362 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 OR5K1Q8NHB7 308 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 UTP15Q8TED0 518 aaKnown RBP12.87□□□□□ -0.35
SEC13-203ENST00000383801 RASSF5Q8WWW0 418 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 VPS50Q96JG6 964 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 DOHHQ9BU89 302 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 CHRNA10Q9GZZ6 450 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 RAB33BQ9H082 229 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 TCEAL2Q9H3H9 227 aaPredicted RBP12.87□□□□□ -0.35
SEC13-203ENST00000383801 SEMA6CQ9H3T2 930 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 ERVMER34-1Q9H9K5 563 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 TM9SF3Q9HD45 589 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 SMPD3Q9NY59 655 aaPredicted RBP12.87□□□□□ -0.35
SEC13-203ENST00000383801 UTS2RQ9UKP6 389 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 CES1P1Q9UKY3 287 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 ANGPT4Q9Y264 503 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 SIT1Q9Y3P8 196 aa12.87□□□□□ -0.35
SEC13-203ENST00000383801 ARHGEF17Q96PE2 2063 aaPredicted RBP12.87□□□□□ -0.35
SEC13-203ENST00000383801 NUP214P35658 2090 aaPredicted RBP12.86□□□□□ -0.35
SEC13-203ENST00000383801 MDC1Q14676 2089 aaKnown RBP12.86□□□□□ -0.35
SEC13-203ENST00000383801 FAM149AA5PLN7 773 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 TMEM247A6NEH6 219 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 SAC3D1A6NKF1 404 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 SRPX2O60687 465 aaPredicted RBP12.86□□□□□ -0.35
SEC13-203ENST00000383801 PDE9AO76083 593 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 WNT1P04628 370 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 FABP3P05413 133 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 ITGA2P17301 1181 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 CSNK2A2P19784 350 aaPredicted RBP12.86□□□□□ -0.35
SEC13-203ENST00000383801 TLX1P31314 330 aaPredicted RBP12.86□□□□□ -0.35
SEC13-203ENST00000383801 ARSFP54793 590 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 NXPH1P58417 271 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 EEF1A2Q05639 463 aaKnown RBP12.86□□□□□ -0.35
SEC13-203ENST00000383801 SCARB2Q14108 478 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 GNA13Q14344 377 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 ZC3H12BQ5HYM0 836 aaKnown RBP12.86□□□□□ -0.35
SEC13-203ENST00000383801 TMEM154Q6P9G4 183 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 C11orf74Q86VG3 221 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 ZDHHC21Q8IVQ6 265 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 CHERPQ8IWX8 916 aaKnown RBP12.86□□□□□ -0.35
SEC13-203ENST00000383801 CARFQ8N187 725 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 FRMD1Q8N878 549 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 C1orf216Q8TAB5 229 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 TMBIM1Q969X1 311 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 ZNF347Q96SE7 839 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 RBM4BQ9BQ04 359 aaKnown RBP12.86□□□□□ -0.35
SEC13-203ENST00000383801 RBM4Q9BWF3 364 aaKnown RBP12.86□□□□□ -0.35
SEC13-203ENST00000383801 NPLQ9BXD5 320 aaPredicted RBP12.86□□□□□ -0.35
SEC13-203ENST00000383801 CXorf36Q9H7Y0 433 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 CLK4Q9HAZ1 481 aaKnown RBP12.86□□□□□ -0.35
SEC13-203ENST00000383801 LYRM4Q9HD34 91 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 A4GALTQ9NPC4 353 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 TEX10Q9NXF1 929 aaPredicted RBP12.86□□□□□ -0.35
SEC13-203ENST00000383801 POMT2Q9UKY4 750 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 PADI4Q9UM07 663 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 DOLKQ9UPQ8 538 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 ENTPD4Q9Y227 616 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 PADI2Q9Y2J8 665 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 SLC22A7Q9Y694 548 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 SPACA6W5XKT8 324 aa12.86□□□□□ -0.35
SEC13-203ENST00000383801 TRIOBPQ9H2D6 2365 aa12.85□□□□□ -0.35
SEC13-203ENST00000383801 A0A1W2PR48 441 aa12.85□□□□□ -0.35
SEC13-203ENST00000383801 A6NHS1 94 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms