RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 FADS3Q9Y5Q0 445 aa6.27□□□□□ -1.41
NEDD9-202ENST00000379446 LYVE1Q9Y5Y7 322 aa6.27□□□□□ -1.41
NEDD9-202ENST00000379446 UNC13CQ8NB66 2214 aa6.27□□□□□ -1.41
NEDD9-202ENST00000379446 SCN4AP35499 1836 aa6.27□□□□□ -1.41
NEDD9-202ENST00000379446 TRBV11-1A0A0K0K1C0 115 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 WWP2O00308 870 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 UBDO15205 165 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 HCRTR2O43614 444 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 SNNO75324 88 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-202ENST00000379446 CCDC159P0C7I6 412 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 IRF2P14316 349 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 ARPC4P59998 168 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 SHC2P98077 582 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 CFHR1Q03591 330 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 CD300CQ08708 224 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 EPS8Q12929 822 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 HKDC1Q2TB90 917 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 AGTRAPQ6RW13 159 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 GPRIN3Q6ZVF9 776 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 CYP4V2Q6ZWL3 525 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-202ENST00000379446 OR1E3Q8WZA6 343 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 EFCAB11Q9BUY7 163 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 REXO4Q9GZR2 422 aaKnown RBP6.26□□□□□ -1.41
NEDD9-202ENST00000379446 PCED1AQ9H1Q7 454 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 TMEM185BQ9H7F4 350 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 ZNF160Q9HCG1 818 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 FGF22Q9HCT0 170 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 KCNJ16Q9NPI9 418 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 ABCB10Q9NRK6 738 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 NLGN3Q9NZ94 848 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 GMEB1Q9Y692 573 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 ATAD5Q96QE3 1844 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 GREB1LQ9C091 1923 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-202ENST00000379446 TRAV17A0A0B4J275 112 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 TRPC5OSA6NMA1 111 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 CCL21O00585 134 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 ZNF749O43361 778 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 AP2A1O95782 977 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 PORP16435 677 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-202ENST00000379446 ZNF182P17025 639 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-202ENST00000379446 FASTKQ14296 549 aaKnown RBP6.26□□□□□ -1.41
NEDD9-202ENST00000379446 KCNAB1Q14722 419 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 NKAIN1Q4KMZ8 207 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 LIPMQ5VYY2 423 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 OPN5Q6U736 354 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 OR2A12Q8NGT7 310 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 DACH2Q96NX9 599 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 TCF12Q99081 682 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 PCDHAC1Q9H158 963 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 CHST8Q9H2A9 424 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 RAD21L1Q9H4I0 556 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 COQ10BQ9H8M1 238 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 IPPKQ9H8X2 491 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 CXorf21Q9HAI6 301 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 RIMKLBQ9ULI2 386 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 CACNA1IQ9P0X4 2223 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 LMO7DNF2Z398 122 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 SLC30A4O14863 429 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 ZFAND5O76080 213 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 EPN2O95208 641 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 CYP4B1P13584 511 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 ALOX12P18054 663 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 NR0B1P51843 470 aaKnown RBP6.26□□□□□ -1.41
NEDD9-202ENST00000379446 NCBP2P52298 156 aaKnown RBP eCLIP6.26□□□□□ -1.41
NEDD9-202ENST00000379446 PSME3P61289 254 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 NAB1Q13506 487 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 DGCR6Q14129 220 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 CLCA4Q14CN2 919 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 LARS2Q15031 903 aaKnown RBP6.26□□□□□ -1.41
NEDD9-202ENST00000379446 HERC3Q15034 1050 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 PRAMEF20Q5VT98 475 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 LYPD8Q6UX82 237 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 C3P1Q6ZMU1 363 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 FAM110BQ8TC76 370 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 LRTOMTQ8WZ04 291 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 ECHDC3Q96DC8 303 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 PKP2Q99959 881 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 TOR3AQ9H497 397 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 ZNF624Q9P2J8 865 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-202ENST00000379446 SLC22A14Q9Y267 594 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 TMEM184BQ9Y519 407 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-202ENST00000379446 AP4S1Q9Y587 144 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 KCTD3Q9Y597 815 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 FUOMA2VDF0 154 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 MRASO14807 208 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 FAM87AP0C7U9 286 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 PEPDP12955 493 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 IL7RP16871 459 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 POU3F2P20265 443 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-202ENST00000379446 EFNA1P20827 205 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-202ENST00000379446 NPRL3Q12980 569 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 MSLNQ13421 630 aaPredicted RBP6.26□□□□□ -1.41
NEDD9-202ENST00000379446 ENPP2Q13822 863 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 NFYCQ13952 458 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 GPR68Q15743 365 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 PDCD4Q53EL6 469 aaKnown RBP6.26□□□□□ -1.41
NEDD9-202ENST00000379446 TRAF7Q6Q0C0 670 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 HSD11B1LQ7Z5J1 315 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 METTL25Q8N6Q8 603 aa6.26□□□□□ -1.41
NEDD9-202ENST00000379446 OR9Q1Q8NGQ5 310 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms