RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 MAT2AP31153 395 aaKnown RBP20.38■□□□□ 0.85
CNTFR-202ENST00000378980 KRT33BQ14525 404 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 TTLQ8NG68 377 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 EXOSC8Q96B26 276 aaKnown RBP20.38■□□□□ 0.85
CNTFR-202ENST00000378980 TEFMQ96QE5 360 aaKnown RBP20.38■□□□□ 0.85
CNTFR-202ENST00000378980 CCDC90BQ9GZT6 254 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 AICDAQ9GZX7 198 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 SIRT3Q9NTG7 399 aaPredicted RBP20.38■□□□□ 0.85
CNTFR-202ENST00000378980 MSRAQ9UJ68 235 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 RAB23Q9ULC3 237 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 TPRKBQ9Y3C4 175 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 CCDC88CQ9P219 2028 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 CEP290O15078 2479 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 A0A0A6YYD5 115 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 PRAMEF33A0A0G2JMD5 474 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 PDZK1P1A8MUH7 402 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 PRAMEF10O60809 474 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 CCNA2P20248 432 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 MAPK10P53779 464 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 RPS26P62854 115 aaKnown RBP20.38■□□□□ 0.85
CNTFR-202ENST00000378980 SLC35A2P78381 396 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 UAP1L1Q3KQV9 507 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 OR4C11Q6IEV9 310 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 REEP3Q6NUK4 255 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 HORMAD2Q8N7B1 307 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 AMER3Q8N944 861 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 SMYD1Q8NB12 490 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 OR10G2Q8NGC3 310 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 HRASLS5Q96KN8 279 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 FEVQ99581 238 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 DGCR6LQ9BY27 220 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 S1PR5Q9H228 398 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 SLC28A3Q9HAS3 691 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 A4GALTQ9NPC4 353 aa20.38■□□□□ 0.85
CNTFR-202ENST00000378980 LRIT2A6NDA9 550 aa20.37■□□□□ 0.85
CNTFR-202ENST00000378980 CACNB4O00305 520 aaPredicted RBP20.37■□□□□ 0.85
CNTFR-202ENST00000378980 SERPIND1P05546 499 aa20.37■□□□□ 0.85
CNTFR-202ENST00000378980 XCR1P46094 333 aa20.37■□□□□ 0.85
CNTFR-202ENST00000378980 CDH12P55289 794 aa20.37■□□□□ 0.85
CNTFR-202ENST00000378980 TRA2BP62995 288 aaKnown RBP20.37■□□□□ 0.85
CNTFR-202ENST00000378980 HPCAP84074 193 aa20.37■□□□□ 0.85
CNTFR-202ENST00000378980 HSPB3Q12988 150 aa20.37■□□□□ 0.85
CNTFR-202ENST00000378980 DCTN2Q13561 401 aaKnown RBP20.37■□□□□ 0.85
CNTFR-202ENST00000378980 CYP27C1Q4G0S4 372 aa20.37■□□□□ 0.85
CNTFR-202ENST00000378980 SDE2Q6IQ49 451 aa20.37■□□□□ 0.85
CNTFR-202ENST00000378980 ZBED6CLQ96FA7 236 aaPredicted RBP20.37■□□□□ 0.85
CNTFR-202ENST00000378980 FBRSQ9HAH7 460 aa20.37■□□□□ 0.85
CNTFR-202ENST00000378980 MRPS30Q9NP92 439 aaKnown RBP20.37■□□□□ 0.85
CNTFR-202ENST00000378980 SCN3BQ9NY72 215 aa20.37■□□□□ 0.85
CNTFR-202ENST00000378980 CLEC1BQ9P126 229 aa20.37■□□□□ 0.85
CNTFR-202ENST00000378980 ERVK-18Q9QC07 812 aa20.37■□□□□ 0.85
CNTFR-202ENST00000378980 TBC1D3DA0A087WVF3 549 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 TBC1D3IA0A087WXS9 549 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 TBC1D3EA0A087X179 549 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 TBC1D3KA0A087X1G2 549 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 TBC1D3FA6NER0 549 aaPredicted RBP20.36■□□□□ 0.85
CNTFR-202ENST00000378980 TBC1D3LB9A6J9 549 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 ADAM23O75077 832 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 TBC1D3HP0C7X1 549 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 COL9A1P20849 921 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 BCL6P41182 706 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 GP2P55259 537 aaKnown RBP20.36■□□□□ 0.85
CNTFR-202ENST00000378980 EMX1Q04741 257 aaPredicted RBP20.36■□□□□ 0.85
CNTFR-202ENST00000378980 NFATC3Q12968 1075 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 EXOC3L2Q2M3D2 409 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 PROX2Q3B8N5 592 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 TBC1D3GQ6DHY5 549 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 TBC1D3CQ6IPX1 549 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 TNFAIP8L2Q6P589 184 aaPredicted RBP20.36■□□□□ 0.85
CNTFR-202ENST00000378980 TBC1D3Q8IZP1 549 aaPredicted RBP20.36■□□□□ 0.85
CNTFR-202ENST00000378980 SLC5A8Q8N695 610 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 IL17RCQ8NAC3 791 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 SCARF2Q96GP6 870 aaPredicted RBP20.36■□□□□ 0.85
CNTFR-202ENST00000378980 C17orf62Q9BQA9 187 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 GPN2Q9H9Y4 310 aaPredicted RBP20.36■□□□□ 0.85
CNTFR-202ENST00000378980 PREBQ9HCU5 417 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 SLC6A20Q9NP91 592 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 PRDM8Q9NQV8 689 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 ACSS1Q9NUB1 689 aaPredicted RBP20.36■□□□□ 0.85
CNTFR-202ENST00000378980 F5P12259 2224 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 SZT2Q5T011 3432 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 A0A0G2JN53 185 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 A0A1W2PQF6 199 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 PPM1DO15297 605 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 PRICKLE3O43900 615 aaPredicted RBP20.36■□□□□ 0.85
CNTFR-202ENST00000378980 B4GALT2O60909 372 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 SSR2P43308 183 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 PXNP49023 591 aaPredicted RBP20.36■□□□□ 0.85
CNTFR-202ENST00000378980 NPTX1Q15818 432 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 RPE65Q16518 533 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 MICAQ29983 383 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 TMEM35AQ53FP2 167 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 AP1ARQ63HQ0 302 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 FAM20CQ8IXL6 584 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 OR52J3Q8NH60 311 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 SLC38A5Q8WUX1 472 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 FAR1Q8WVX9 515 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 PIP5K1AQ99755 562 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 FGF22Q9HCT0 170 aa20.36■□□□□ 0.85
CNTFR-202ENST00000378980 TAS2R7Q9NYW3 318 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms