RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 PEX16Q9Y5Y5 336 aa17.35■□□□□ 0.37
TDP2-202ENST00000378198 CFAP20Q9Y6A4 193 aaKnown RBP17.35■□□□□ 0.37
TDP2-202ENST00000378198 SLC9A3R1O14745 358 aaPredicted RBP17.34■□□□□ 0.37
TDP2-202ENST00000378198 POP7O75817 140 aaKnown RBP17.34■□□□□ 0.37
TDP2-202ENST00000378198 CISD3P0C7P0 127 aa17.34■□□□□ 0.37
TDP2-202ENST00000378198 CHMP24386 653 aa17.34■□□□□ 0.37
TDP2-202ENST00000378198 ALDH9A1P49189 494 aa17.34■□□□□ 0.37
TDP2-202ENST00000378198 TMED10P49755 219 aaKnown RBP17.34■□□□□ 0.37
TDP2-202ENST00000378198 DUSP7Q16829 419 aa17.34■□□□□ 0.37
TDP2-202ENST00000378198 TIMM50Q3ZCQ8 353 aa17.34■□□□□ 0.37
TDP2-202ENST00000378198 FAM92BQ6ZTR7 304 aa17.34■□□□□ 0.37
TDP2-202ENST00000378198 NCCRP1Q6ZVX7 275 aaPredicted RBP17.34■□□□□ 0.37
TDP2-202ENST00000378198 OR2L2Q8NH16 312 aa17.34■□□□□ 0.37
TDP2-202ENST00000378198 HPS1Q92902 700 aa17.34■□□□□ 0.37
TDP2-202ENST00000378198 CXorf36Q9H7Y0 433 aa17.34■□□□□ 0.37
TDP2-202ENST00000378198 PRDM8Q9NQV8 689 aa17.34■□□□□ 0.37
TDP2-202ENST00000378198 WBP11Q9Y2W2 641 aaKnown RBP17.34■□□□□ 0.37
TDP2-202ENST00000378198 C5orf58C9J3I9 102 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 K7ESM1 405 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 SPINT1O43278 529 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 PAPLNO95428 1278 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 RECKO95980 971 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 CLTBP09497 229 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 MNX1P50219 401 aaPredicted RBP17.33■□□□□ 0.37
TDP2-202ENST00000378198 UGT2B15P54855 530 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.33■□□□□ 0.37
TDP2-202ENST00000378198 ZNF770Q6IQ21 691 aaPredicted RBP17.33■□□□□ 0.37
TDP2-202ENST00000378198 CEACAM20Q6UY09 585 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 VN1R5Q7Z5H4 357 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 FAM129CQ86XR2 697 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 FAM46DQ8NEK8 389 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 RAD51AP1Q96B01 352 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 NEURL3Q96EH8 262 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 CHCHD6Q9BRQ6 235 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 CENPOQ9BU64 300 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 ZDHHC5Q9C0B5 715 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 A4GALTQ9NPC4 353 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 WDR37Q9Y2I8 494 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 SNX8Q9Y5X2 465 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 IRAK3Q9Y616 596 aa17.33■□□□□ 0.37
TDP2-202ENST00000378198 DSPPQ9NZW4 1301 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 M0R129 80 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 ZW10O43264 779 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 TBX1O43435 398 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 TBX19O60806 448 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 LINC00271P0C7V0 271 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 HSMCR30P0CW71 290 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 PIPP12273 146 aaPredicted RBP17.33■□□□□ 0.36
TDP2-202ENST00000378198 CCL5P13501 91 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 CSF2RAP15509 400 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 DDCP20711 480 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 CNR2P34972 360 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 CYP4F2P78329 520 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 DHCR24Q15392 516 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 SAXO2Q658L1 398 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 C19orf48Q6RUI8 117 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 ZNF547Q8IVP9 402 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 OR5P2Q8WZ92 322 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 RHCGQ9UBD6 479 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 TMCC3Q9ULS5 477 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 SLC6A14Q9UN76 642 aa17.33■□□□□ 0.36
TDP2-202ENST00000378198 MED26O95402 600 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 ADAP00813 363 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 DDX5P17844 614 aaKnown RBP17.32■□□□□ 0.36
TDP2-202ENST00000378198 FUT4P22083 530 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 KELP23276 732 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 ITGB7P26010 798 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 SOX6P35712 828 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 DPTQ07507 201 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 NFE2L1Q14494 772 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 PUM1Q14671 1186 aaKnown RBP eCLIP17.32■□□□□ 0.36
TDP2-202ENST00000378198 MED22Q15528 200 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 STEAP3Q658P3 488 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 PLAG1Q6DJT9 500 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 RTL10Q7L3V2 364 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 PARP16Q8N5Y8 322 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 POC5Q8NA72 575 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 APOBEC4Q8WW27 367 aaKnown RBP17.32■□□□□ 0.36
TDP2-202ENST00000378198 MGLLQ99685 303 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 SORBS1Q9BX66 1292 aaKnown RBP17.32■□□□□ 0.36
TDP2-202ENST00000378198 RNF167Q9H6Y7 350 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 ASF1AQ9Y294 204 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 DENND4AQ7Z401 1863 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 ANKDD1BA6NHY2 528 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 CCRL2O00421 344 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 VEGFDO43915 354 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 PDE9AO76083 593 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 SEMA3DO95025 777 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 SLC15A1P46059 708 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 CRISP3P54108 245 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 LIM2P55344 173 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 ERVFC1P60507 584 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 SLC13A2Q13183 592 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 MMP21Q8N119 569 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 HORMAD2Q8N7B1 307 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 TMIEQ8NEW7 156 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 ARRDC3Q96B67 414 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 ZSWIM3Q96MP5 696 aa17.32■□□□□ 0.36
TDP2-202ENST00000378198 PNMA8CA0A1B0GUJ8 204 aa17.31■□□□□ 0.36
TDP2-202ENST00000378198 HIDE1A8MVS5 230 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms