RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 PRTFDC1Q9NRG1 225 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 ZNF446Q9NWS9 450 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 FBXL4Q9UKA2 621 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 FBXW2Q9UKT8 454 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 ASB4Q9Y574 426 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 CACNA1BQ00975 2339 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 IGKV3D-11A0A0A0MRZ8 115 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 IGHV1-45A0A0A0MS14 117 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 PROM1O43490 865 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 ATP8B1O43520 1251 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 RGS14O43566 566 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 KLHL41O60662 606 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 CTNSO60931 367 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 RSL1D1O76021 490 aaKnown RBP12.45□□□□□ -0.42
CKAP2-202ENST00000378034 KLK1P06870 262 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 BGNP21810 368 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 PRPH2P23942 346 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 TPP2P29144 1249 aaPredicted RBP12.45□□□□□ -0.42
CKAP2-202ENST00000378034 ARRB2P32121 409 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 SLC1A6P48664 564 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 EFNA3P52797 238 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 SOX8P57073 446 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 AP2B1P63010 937 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 TNFRSF17Q02223 184 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 AIMP2Q13155 320 aaKnown RBP12.45□□□□□ -0.42
CKAP2-202ENST00000378034 BIKQ13323 160 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 LINC00303Q3SY05 128 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 SCUBE1Q8IWY4 988 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 FAM47BQ8NA70 645 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 MGARPQ8TDB4 240 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 TUBB6Q9BUF5 446 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 ILKAPQ9H0C8 392 aaPredicted RBP12.45□□□□□ -0.42
CKAP2-202ENST00000378034 WDR41Q9HAD4 459 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 PFDN4Q9NQP4 134 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 RIC8BQ9NVN3 520 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 MCM8Q9UJA3 840 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 TUBD1Q9UJT1 453 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 RAP2CQ9Y3L5 183 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 DNAJC15Q9Y5T4 150 aa12.45□□□□□ -0.42
CKAP2-202ENST00000378034 PCSK5Q92824 1860 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 NSG1A0A0A6YYJ2 146 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 TCRBV16S1A1N1A0A5B0 115 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 TMPRSS11DO60235 418 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 SFTPCP11686 197 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 COX6A1P12074 109 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 ICAM2P13598 275 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 CHN1P15882 459 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 PPP2R1BP30154 601 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 GSTM5P46439 218 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 HNRNPH2P55795 449 aaKnown RBP12.44□□□□□ -0.42
CKAP2-202ENST00000378034 POLE2P56282 527 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 BTG2P78543 158 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 HMGCS1Q01581 520 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 ACSM2AQ08AH3 577 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 UGT3A2Q3SY77 523 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 ATG16L1Q676U5 607 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 ACSM2BQ68CK6 577 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 FAAH2Q6GMR7 532 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 GALNT18Q6P9A2 607 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 C1orf52Q8N6N3 182 aaKnown RBP12.44□□□□□ -0.42
CKAP2-202ENST00000378034 EFCAB3Q8N7B9 438 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 FAM76AQ8TAV0 307 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 TANKQ92844 425 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 C8orf44Q96CB5 159 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 CSF3RQ99062 836 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 RPF2Q9H7B2 306 aaKnown RBP12.44□□□□□ -0.42
CKAP2-202ENST00000378034 ZDHHC2Q9UIJ5 367 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 HAO1Q9UJM8 370 aa12.44□□□□□ -0.42
CKAP2-202ENST00000378034 MAPK12P53778 367 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 SLC13A2Q13183 592 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 PCOLCEQ15113 449 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 SPDYAQ5MJ70 313 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 CES4AQ5XG92 561 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 SCIMPQ6UWF3 145 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 TMEM52Q8NDY8 209 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 TWIST2Q8WVJ9 160 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 TSLPQ969D9 159 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 C11orf24Q96F05 449 aaPredicted RBP12.43□□□□□ -0.42
CKAP2-202ENST00000378034 NECTIN3Q9NQS3 549 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 G3BP2Q9UN86 482 aaKnown RBP12.43□□□□□ -0.42
CKAP2-202ENST00000378034 FIS1Q9Y3D6 152 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 ATG4BQ9Y4P1 393 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 CCL27Q9Y4X3 112 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 A0A1W2PR48 441 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 OR2W5A6NFC9 320 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 MKRN2OSH3BPM6 223 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 KLF11O14901 512 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 ITM2AO43736 263 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 CEACAM4O75871 244 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 NR2F6P10588 404 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 MAOAP21397 527 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 HNRNPFP52597 415 aaKnown RBP12.43□□□□□ -0.42
CKAP2-202ENST00000378034 OR4D2P58180 307 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 PPP2R2AP63151 447 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 EEF1A2Q05639 463 aaKnown RBP12.43□□□□□ -0.42
CKAP2-202ENST00000378034 ACTN3Q08043 901 aaPredicted RBP12.43□□□□□ -0.42
CKAP2-202ENST00000378034 BST1Q10588 318 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 SERTAD2Q14140 314 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 FAM219BQ5XKK7 198 aa12.43□□□□□ -0.42
CKAP2-202ENST00000378034 CPZQ66K79 652 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms