RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 MDS2Q8NDY4 140 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 SSC4DQ8WTU2 575 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 C5orf34Q96MH7 638 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 MAPKAP1Q9BPZ7 522 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 CCDC77Q9BR77 488 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 NOL11Q9H8H0 719 aaKnown RBP15.72■□□□□ 0.11
HMGN4-201ENST00000377575 MS4A12Q9NXJ0 267 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 ANKRD10Q9NXR5 420 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 KCMF1Q9P0J7 381 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 PSMC3IPQ9P2W1 217 aaPredicted RBP15.72■□□□□ 0.11
HMGN4-201ENST00000377575 PHF11Q9UIL8 331 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 PCTPQ9UKL6 214 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 CLDN16Q9Y5I7 305 aa15.72■□□□□ 0.11
HMGN4-201ENST00000377575 TGFBR3LH3BV60 316 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 PLPP1O14494 284 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 OR7A17O14581 309 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 MAN1A2O60476 641 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 SEMA7AO75326 666 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 IFNA16P05015 189 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 FAM153BP0C7A2 387 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 CPN2P22792 545 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 GCAP28676 217 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 TPP2P29144 1249 aaPredicted RBP15.71■□□□□ 0.11
HMGN4-201ENST00000377575 CD96P40200 585 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 RPS13P62277 151 aaKnown RBP15.71■□□□□ 0.11
HMGN4-201ENST00000377575 FAM153CQ494X1 144 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 GSPT2Q8IYD1 628 aaKnown RBP15.71■□□□□ 0.11
HMGN4-201ENST00000377575 ZCCHC7Q8N3Z6 543 aaKnown RBP15.71■□□□□ 0.11
HMGN4-201ENST00000377575 RNF175Q8N4F7 328 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 TMEM178AQ8NBL3 297 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 APCDD1LQ8NCL9 501 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 OR52B6Q8NGF0 335 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 DNAJB8Q8NHS0 232 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 NR4A3Q92570 626 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 DAZLQ92904 295 aaKnown RBP15.71■□□□□ 0.11
HMGN4-201ENST00000377575 NCLNQ969V3 563 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 SIGLEC12Q96PQ1 595 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 TAAR6Q96RI8 345 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 NTMT1Q9BV86 223 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 TXLNGYQ9BZA5 131 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 FBXW2Q9UKT8 454 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 PPT2Q9UMR5 302 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 PPIEQ9UNP9 301 aaKnown RBP15.71■□□□□ 0.11
HMGN4-201ENST00000377575 RNF11Q9Y3C5 154 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 CLCA3PQ9Y6N3 262 aa15.71■□□□□ 0.11
HMGN4-201ENST00000377575 SPTAN1Q13813 2472 aaKnown RBP15.7■□□□□ 0.1
HMGN4-201ENST00000377575 USP9YO00507 2555 aaPredicted RBP15.7■□□□□ 0.1
HMGN4-201ENST00000377575 FOXE1O00358 373 aaPredicted RBP15.7■□□□□ 0.1
HMGN4-201ENST00000377575 DDAH2O95865 285 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 RPS17P08708 135 aaKnown RBP15.7■□□□□ 0.1
HMGN4-201ENST00000377575 TAC1P20366 129 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 PPP2R1BP30154 601 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 TLX1P31314 330 aaPredicted RBP15.7■□□□□ 0.1
HMGN4-201ENST00000377575 BUD31P41223 144 aaPredicted RBP15.7■□□□□ 0.1
HMGN4-201ENST00000377575 MLF1P58340 268 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 TNFRSF17Q02223 184 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 SLAMF1Q13291 335 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 CUL3Q13618 768 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 SLC29A2Q14542 456 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 ZRSR2Q15696 482 aaKnown RBP15.7■□□□□ 0.1
HMGN4-201ENST00000377575 GGTA1PQ4G0N0 100 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 TEX35Q5T0J7 233 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 ZNF324BQ6AW86 544 aaPredicted RBP15.7■□□□□ 0.1
HMGN4-201ENST00000377575 TTC19Q6DKK2 380 aaPredicted RBP15.7■□□□□ 0.1
HMGN4-201ENST00000377575 ARMC10Q8N2F6 343 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 FAM98AQ8NCA5 519 aaKnown RBP15.7■□□□□ 0.1
HMGN4-201ENST00000377575 LRRN4CLQ8ND94 238 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 OR14A16Q8NHC5 309 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 WDR20Q8TBZ3 569 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 SCMH1Q96GD3 660 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 CDK15Q96Q40 435 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 SORBS1Q9BX66 1292 aaKnown RBP15.7■□□□□ 0.1
HMGN4-201ENST00000377575 ALOXE3Q9BYJ1 711 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 L2HGDHQ9H9P8 463 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 LYARQ9NX58 379 aaKnown RBP15.7■□□□□ 0.1
HMGN4-201ENST00000377575 PSD3Q9NYI0 1048 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 LRFN1Q9P244 771 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 SLC5A6Q9Y289 635 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 POLEQ07864 2286 aa15.7■□□□□ 0.1
HMGN4-201ENST00000377575 SPTBN1Q01082 2364 aaKnown RBP15.7■□□□□ 0.1
HMGN4-201ENST00000377575 A8MT66 165 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 LDB3O75112 727 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 SEMA3DO95025 777 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 OTCP00480 354 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 COX7A2P14406 83 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 CYB561P49447 251 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 TDGF1P3P51864 188 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 IFT88Q13099 833 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 TRAF3Q13114 568 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 FRG2Q64ET8 278 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 SPINK14Q6IE38 97 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 CYP20A1Q6UW02 462 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 GPR180Q86V85 440 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 NUDT13Q86X67 352 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 ACMSDQ8TDX5 336 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 NSUN5Q96P11 429 aaKnown RBP15.69■□□□□ 0.1
HMGN4-201ENST00000377575 FRG2BQ96QU4 278 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 SERPINI1Q99574 410 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 C1QTNF3Q9BXJ4 246 aa15.69■□□□□ 0.1
HMGN4-201ENST00000377575 SEMA4BQ9NPR2 832 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms