RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 GPR143P51810 404 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 NR0B1P51843 470 aaKnown RBP17.84■□□□□ 0.45
CBWD3-204ENST00000377349 IRF9Q00978 393 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 DLG1Q12959 904 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 NAB1Q13506 487 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 DDX39BQ13838 428 aaKnown RBP17.84■□□□□ 0.45
CBWD3-204ENST00000377349 RUNX2Q13950 521 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 PAGE2BQ5JRK9 111 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 CYS1Q717R9 158 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 MDGA2Q7Z553 956 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 SCUBE1Q8IWY4 988 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 POGLUT1Q8NBL1 392 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 C16orf52Q8NHV5 167 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 FAM57AQ8TBR7 257 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 KCTD4Q8WVF5 259 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 SDCCAG3Q96C92 435 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 UBXN10Q96LJ8 280 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 F2RL3Q96RI0 385 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 EFCAB11Q9BUY7 163 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 DEFB126Q9BYW3 111 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 CD244Q9BZW8 370 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 PHACTR1Q9C0D0 580 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 PRTFDC1Q9NRG1 225 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 PLSCR2Q9NRY7 297 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 OPTCQ9UBM4 332 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 ITGB1BP2Q9UKP3 347 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 PPT2Q9UMR5 302 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 MRPS33Q9Y291 106 aaKnown RBP17.84■□□□□ 0.45
CBWD3-204ENST00000377349 ANGPTL3Q9Y5C1 460 aa17.84■□□□□ 0.45
CBWD3-204ENST00000377349 TRBV11-1A0A0K0K1C0 115 aa17.83■□□□□ 0.45
CBWD3-204ENST00000377349 CLEC3AO75596 197 aa17.83■□□□□ 0.45
CBWD3-204ENST00000377349 IGFBP2P18065 325 aa17.83■□□□□ 0.45
CBWD3-204ENST00000377349 PPP2R1BP30154 601 aa17.83■□□□□ 0.45
CBWD3-204ENST00000377349 HPDP32754 393 aaPredicted RBP17.83■□□□□ 0.45
CBWD3-204ENST00000377349 GGT5P36269 586 aa17.83■□□□□ 0.45
CBWD3-204ENST00000377349 KCNC1P48547 511 aa17.83■□□□□ 0.45
CBWD3-204ENST00000377349 TGM3Q08188 693 aa17.83■□□□□ 0.45
CBWD3-204ENST00000377349 LRRC70Q7Z2Q7 622 aa17.83■□□□□ 0.45
CBWD3-204ENST00000377349 VN1R5Q7Z5H4 357 aa17.83■□□□□ 0.45
CBWD3-204ENST00000377349 ZFP62Q8NB50 900 aaPredicted RBP17.83■□□□□ 0.45
CBWD3-204ENST00000377349 B3GNT7Q8NFL0 401 aa17.83■□□□□ 0.45
CBWD3-204ENST00000377349 OR2L5Q8NG80 312 aa17.83■□□□□ 0.45
CBWD3-204ENST00000377349 TMEM125Q96AQ2 219 aa17.83■□□□□ 0.45
CBWD3-204ENST00000377349 NXNL1Q96CM4 212 aa17.83■□□□□ 0.45
CBWD3-204ENST00000377349 IGSF5Q9NSI5 407 aa17.83■□□□□ 0.45
CBWD3-204ENST00000377349 PTBP2Q9UKA9 531 aaKnown RBP17.83■□□□□ 0.45
CBWD3-204ENST00000377349 FBXW2Q9UKT8 454 aa17.83■□□□□ 0.45
CBWD3-204ENST00000377349 KLF13Q9Y2Y9 288 aaPredicted RBP17.83■□□□□ 0.45
CBWD3-204ENST00000377349 ACOT9Q9Y305 439 aa17.83■□□□□ 0.45
CBWD3-204ENST00000377349 SAP18O00422 153 aaKnown RBP17.82■□□□□ 0.44
CBWD3-204ENST00000377349 CLDN4O14493 209 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 FCHO1O14526 889 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 TFECO14948 347 aaPredicted RBP17.82■□□□□ 0.44
CBWD3-204ENST00000377349 HS6ST1O60243 411 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 PRKNO60260 465 aaPredicted RBP17.82■□□□□ 0.44
CBWD3-204ENST00000377349 PRAMEF4O60810 478 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 KERAO60938 352 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 IFNA16P05015 189 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 GFAPP14136 432 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 CD22P20273 847 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 GSTM2P28161 218 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 PHBP35232 272 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 PTGS2P35354 604 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 ARL1P40616 181 aaPredicted RBP17.82■□□□□ 0.44
CBWD3-204ENST00000377349 HNRNPFP52597 415 aaKnown RBP17.82■□□□□ 0.44
CBWD3-204ENST00000377349 RAB38P57729 211 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 LAPTM5Q13571 262 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 TERF2Q15554 542 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 CDKL4Q5MAI5 379 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 PRAMEF9Q5VWM5 478 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 ZNF572Q7Z3I7 529 aaPredicted RBP17.82■□□□□ 0.44
CBWD3-204ENST00000377349 CD163Q86VB7 1156 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 TMEM52Q8NDY8 209 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 IFT81Q8WYA0 676 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 CSF3RQ99062 836 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 EHD1Q9H4M9 534 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 NT5DC2Q9H857 520 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 MCCC2Q9HCC0 563 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 SNX15Q9NRS6 342 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 DEPPQ9NTK1 212 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 MTRF1LQ9UGC7 380 aaKnown RBP17.82■□□□□ 0.44
CBWD3-204ENST00000377349 ZNF490Q9ULM2 529 aaPredicted RBP17.82■□□□□ 0.44
CBWD3-204ENST00000377349 MMACHCQ9Y4U1 282 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 NAV3Q8IVL0 2385 aa17.82■□□□□ 0.44
CBWD3-204ENST00000377349 ANKHD1Q8IWZ3 2542 aaKnown RBP17.81■□□□□ 0.44
CBWD3-204ENST00000377349 TMEM200CA6NKL6 621 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 PEX1O43933 1283 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 ITGA10O75578 1167 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 TBX6O95947 436 aaPredicted RBP17.81■□□□□ 0.44
CBWD3-204ENST00000377349 CLCN2P51788 898 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 MTTPP55157 894 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 TLE4Q04727 773 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 EMC4Q5J8M3 183 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 MEX3BQ6ZN04 569 aaKnown RBP17.81■□□□□ 0.44
CBWD3-204ENST00000377349 ISCA2Q86U28 154 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 CYP4Z2PQ8N1L4 340 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 TEX9Q8N6V9 391 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 CA5BP1Q8WTZ4 195 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 SERINC2Q96SA4 455 aa17.81■□□□□ 0.44
CBWD3-204ENST00000377349 NPLQ9BXD5 320 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms