RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 CDH12P55289 794 aa19.24■□□□□ 0.67
VSX1-202ENST00000376709 SPDYE7PQ495Y7 208 aa19.24■□□□□ 0.67
VSX1-202ENST00000376709 MTSS1LQ765P7 747 aa19.24■□□□□ 0.67
VSX1-202ENST00000376709 SLC30A8Q8IWU4 369 aa19.24■□□□□ 0.67
VSX1-202ENST00000376709 OR52E1Q8NGJ3 308 aa19.24■□□□□ 0.67
VSX1-202ENST00000376709 OR2L8Q8NGY9 312 aa19.24■□□□□ 0.67
VSX1-202ENST00000376709 GEMIN6Q8WXD5 167 aaKnown RBP19.24■□□□□ 0.67
VSX1-202ENST00000376709 NEURL3Q96EH8 262 aa19.24■□□□□ 0.67
VSX1-202ENST00000376709 C17orf62Q9BQA9 187 aa19.24■□□□□ 0.67
VSX1-202ENST00000376709 EPS8L2Q9H6S3 715 aa19.24■□□□□ 0.67
VSX1-202ENST00000376709 TEX10Q9NXF1 929 aaPredicted RBP19.24■□□□□ 0.67
VSX1-202ENST00000376709 SCN3BQ9NY72 215 aa19.24■□□□□ 0.67
VSX1-202ENST00000376709 PNMA8BQ9ULN7 279 aaPredicted RBP19.24■□□□□ 0.67
VSX1-202ENST00000376709 TPRKBQ9Y3C4 175 aa19.24■□□□□ 0.67
VSX1-202ENST00000376709 F5P12259 2224 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 TBX19O60806 448 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 CLEC3AO75596 197 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 SSR2P43308 183 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 PCBP3P57721 371 aaKnown RBP19.23■□□□□ 0.67
VSX1-202ENST00000376709 HTR4Q13639 388 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 UAP1L1Q3KQV9 507 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 FGD3Q5JSP0 725 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 GTF2IRD2BQ6EKJ0 949 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 OR4C11Q6IEV9 310 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 REEP3Q6NUK4 255 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 TNFAIP8L2Q6P589 184 aaPredicted RBP19.23■□□□□ 0.67
VSX1-202ENST00000376709 DHRS4L2Q6PKH6 230 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 GTF2IRD2Q86UP8 949 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 FAM20CQ8IXL6 584 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 TTLQ8NG68 377 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 ZBED6CLQ96FA7 236 aaPredicted RBP19.23■□□□□ 0.67
VSX1-202ENST00000376709 MRPS30Q9NP92 439 aaKnown RBP19.23■□□□□ 0.67
VSX1-202ENST00000376709 PRDM8Q9NQV8 689 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 THSD1Q9NS62 852 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 ADAM29Q9UKF5 820 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.23■□□□□ 0.67
VSX1-202ENST00000376709 C5orf58C9J3I9 102 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 HOXB2P14652 356 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 GSTM5P46439 218 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 RPP38P78345 283 aaKnown RBP19.23■□□□□ 0.67
VSX1-202ENST00000376709 DCTN2Q13561 401 aaKnown RBP19.23■□□□□ 0.67
VSX1-202ENST00000376709 SAXO2Q658L1 398 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 UBE3DQ7Z6J8 389 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 RAB2BQ8WUD1 216 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 FEVQ99581 238 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 GABRG3Q99928 467 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 MVB12BQ9H7P6 319 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 DDX31Q9H8H2 851 aaKnown RBP19.23■□□□□ 0.67
VSX1-202ENST00000376709 RASSF1Q9NS23 344 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 TMEM184CQ9NVA4 438 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 NAALAD2Q9Y3Q0 740 aa19.23■□□□□ 0.67
VSX1-202ENST00000376709 KCNJ13O60928 360 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 EGFP01133 1207 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 CCNA2P20248 432 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 CXCR4P61073 352 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 GPR153Q6NV75 609 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 ARMC8Q8IUR7 673 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 HORMAD2Q8N7B1 307 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 IL17RCQ8NAC3 791 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 OR10G2Q8NGC3 310 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 THAP11Q96EK4 314 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 FAM32AQ9Y421 112 aaKnown RBP19.22■□□□□ 0.67
VSX1-202ENST00000376709 PRAMEF33A0A0G2JMD5 474 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 TRBC2A0A5B9 178 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 LRIT2A6NDA9 550 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 PRAMEF25A6NGN4 478 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 PRAMEF10O60809 474 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 ADAM23O75077 832 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 STATHP02808 62 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 BCHEP06276 602 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 COL9A1P20849 921 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 CD247P20963 164 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 CTHP32929 405 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 LTBRP36941 435 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 EMP3P54852 163 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 PCBP4P57723 403 aaKnown RBP19.22■□□□□ 0.67
VSX1-202ENST00000376709 MAD2L1BPQ15013 274 aaPredicted RBP19.22■□□□□ 0.67
VSX1-202ENST00000376709 SLC44A2Q8IWA5 706 aaPredicted RBP19.22■□□□□ 0.67
VSX1-202ENST00000376709 CREB3L4Q8TEY5 395 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 MUL1Q969V5 352 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 FAM131CQ96AQ9 280 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 PDXPQ96GD0 296 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 KCNC2Q96PR1 638 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 TEFMQ96QE5 360 aaKnown RBP19.22■□□□□ 0.67
VSX1-202ENST00000376709 GABARAPL3Q9BY60 117 aa19.22■□□□□ 0.67
VSX1-202ENST00000376709 PPM1DO15297 605 aa19.21■□□□□ 0.67
VSX1-202ENST00000376709 FOXD2O60548 495 aaPredicted RBP19.21■□□□□ 0.67
VSX1-202ENST00000376709 KLF8O95600 359 aaPredicted RBP19.21■□□□□ 0.67
VSX1-202ENST00000376709 JUNDP17535 347 aa19.21■□□□□ 0.67
VSX1-202ENST00000376709 ITIH1P19827 911 aa19.21■□□□□ 0.67
VSX1-202ENST00000376709 PCMT1P22061 227 aa19.21■□□□□ 0.67
VSX1-202ENST00000376709 ARHGAP22Q7Z5H3 698 aa19.21■□□□□ 0.67
VSX1-202ENST00000376709 SLC5A8Q8N695 610 aa19.21■□□□□ 0.67
VSX1-202ENST00000376709 AMER3Q8N944 861 aa19.21■□□□□ 0.67
VSX1-202ENST00000376709 ZNF540Q8NDQ6 660 aa19.21■□□□□ 0.67
VSX1-202ENST00000376709 PITX2Q99697 317 aa19.21■□□□□ 0.67
VSX1-202ENST00000376709 FGF22Q9HCT0 170 aa19.21■□□□□ 0.67
VSX1-202ENST00000376709 CCDC88CQ9P219 2028 aa19.21■□□□□ 0.67
VSX1-202ENST00000376709 J3KTA2 159 aa19.2■□□□□ 0.66
VSX1-202ENST00000376709 DNAJB5O75953 348 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms