RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 CMC1Q7Z7K0 106 aa19.58■□□□□ 0.72
VSX1-201ENST00000376707 DAZLQ92904 295 aaKnown RBP19.58■□□□□ 0.72
VSX1-201ENST00000376707 UBE2E3Q969T4 207 aa19.58■□□□□ 0.72
VSX1-201ENST00000376707 MTFMTQ96DP5 389 aaKnown RBP19.58■□□□□ 0.72
VSX1-201ENST00000376707 LRRC1Q9BTT6 524 aa19.58■□□□□ 0.72
VSX1-201ENST00000376707 NMRAL1Q9HBL8 299 aa19.58■□□□□ 0.72
VSX1-201ENST00000376707 PRDM7Q9NQW5 492 aa19.58■□□□□ 0.72
VSX1-201ENST00000376707 KCMF1Q9P0J7 381 aa19.58■□□□□ 0.72
VSX1-201ENST00000376707 LRBAP50851 2863 aa19.58■□□□□ 0.72
VSX1-201ENST00000376707 MYOCOSA0A1B0GUC4 107 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 A8MVJ9 347 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 SUPT3HB4E1H0 165 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 E9PLN8 166 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 HS6ST1O60243 411 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 PRKNO60260 465 aaPredicted RBP19.57■□□□□ 0.72
VSX1-201ENST00000376707 CDC40O60508 579 aaKnown RBP eCLIP19.57■□□□□ 0.72
VSX1-201ENST00000376707 SUPT3HO75486 399 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 OR2J2O76002 312 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 TUBB4AP04350 444 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 EPORP19235 508 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 PTGS2P35354 604 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 GMPRP36959 345 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 DLG1Q12959 904 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 E2F2Q14209 437 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 HSDL2Q6YN16 418 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 C16orf47Q6ZP98 133 aaPredicted RBP19.57■□□□□ 0.72
VSX1-201ENST00000376707 CCDC91Q7Z6B0 441 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 FGD2Q7Z6J4 655 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 TBC1D1Q86TI0 1168 aaPredicted RBP19.57■□□□□ 0.72
VSX1-201ENST00000376707 GPALPP1Q8IXQ4 340 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 C16orf52Q8NHV5 167 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 PHF10Q8WUB8 498 aaKnown RBP19.57■□□□□ 0.72
VSX1-201ENST00000376707 VKORC1Q9BQB6 163 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 TBCDQ9BTW9 1192 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 ALOXE3Q9BYJ1 711 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 LIN28AQ9H9Z2 209 aaKnown RBP19.57■□□□□ 0.72
VSX1-201ENST00000376707 LYRM4Q9HD34 91 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 IGSF5Q9NSI5 407 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 HPF1Q9NWY4 346 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 NUDT4Q9NZJ9 180 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 PPT2Q9UMR5 302 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 SPACA6W5XKT8 324 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 ABCA12Q86UK0 2595 aa19.57■□□□□ 0.72
VSX1-201ENST00000376707 A0A1B0GTH9 108 aa19.56■□□□□ 0.72
VSX1-201ENST00000376707 KERAO60938 352 aa19.56■□□□□ 0.72
VSX1-201ENST00000376707 TPOP07202 933 aa19.56■□□□□ 0.72
VSX1-201ENST00000376707 PCNAP12004 261 aa19.56■□□□□ 0.72
VSX1-201ENST00000376707 TNNI3P19429 210 aa19.56■□□□□ 0.72
VSX1-201ENST00000376707 CASP2P42575 452 aa19.56■□□□□ 0.72
VSX1-201ENST00000376707 CDSNQ15517 529 aa19.56■□□□□ 0.72
VSX1-201ENST00000376707 WHAMMP3Q1A5X7 153 aa19.56■□□□□ 0.72
VSX1-201ENST00000376707 TMEM35AQ53FP2 167 aa19.56■□□□□ 0.72
VSX1-201ENST00000376707 ZFP62Q8NB50 900 aaPredicted RBP19.56■□□□□ 0.72
VSX1-201ENST00000376707 MORN4Q8NDC4 146 aa19.56■□□□□ 0.72
VSX1-201ENST00000376707 PSD4Q8NDX1 1056 aa19.56■□□□□ 0.72
VSX1-201ENST00000376707 OR14A16Q8NHC5 309 aa19.56■□□□□ 0.72
VSX1-201ENST00000376707 ZNF473Q8WTR7 871 aaKnown RBP19.56■□□□□ 0.72
VSX1-201ENST00000376707 SREK1Q8WXA9 508 aaKnown RBP19.56■□□□□ 0.72
VSX1-201ENST00000376707 ASB15Q8WXK1 588 aa19.56■□□□□ 0.72
VSX1-201ENST00000376707 C16orf45Q96MC5 204 aaPredicted RBP19.56■□□□□ 0.72
VSX1-201ENST00000376707 ATOH8Q96SQ7 321 aa19.56■□□□□ 0.72
VSX1-201ENST00000376707 MS4A8Q9BY19 250 aa19.56■□□□□ 0.72
VSX1-201ENST00000376707 OR8D2Q9GZM6 311 aa19.56■□□□□ 0.72
VSX1-201ENST00000376707 MYOTQ9UBF9 498 aa19.56■□□□□ 0.72
VSX1-201ENST00000376707 OPTCQ9UBM4 332 aa19.56■□□□□ 0.72
VSX1-201ENST00000376707 VTI1BQ9UEU0 232 aa19.56■□□□□ 0.72
VSX1-201ENST00000376707 RTCAO00442 366 aaKnown RBP19.55■□□□□ 0.72
VSX1-201ENST00000376707 SH3BGRLO75368 114 aa19.55■□□□□ 0.72
VSX1-201ENST00000376707 LTA4HP09960 611 aaKnown RBP19.55■□□□□ 0.72
VSX1-201ENST00000376707 ATP5A1P25705 553 aaKnown RBP19.55■□□□□ 0.72
VSX1-201ENST00000376707 PCDH1Q08174 1060 aa19.55■□□□□ 0.72
VSX1-201ENST00000376707 SERTAD2Q14140 314 aa19.55■□□□□ 0.72
VSX1-201ENST00000376707 AP5B1Q2VPB7 878 aa19.55■□□□□ 0.72
VSX1-201ENST00000376707 CMPK2Q5EBM0 449 aa19.55■□□□□ 0.72
VSX1-201ENST00000376707 MED27Q6P2C8 311 aa19.55■□□□□ 0.72
VSX1-201ENST00000376707 IL20RBQ6UXL0 311 aa19.55■□□□□ 0.72
VSX1-201ENST00000376707 ZNF793Q6ZN11 406 aa19.55■□□□□ 0.72
VSX1-201ENST00000376707 CHSY3Q70JA7 882 aa19.55■□□□□ 0.72
VSX1-201ENST00000376707 UBE3DQ7Z6J8 389 aa19.55■□□□□ 0.72
VSX1-201ENST00000376707 RELL1Q8IUW5 271 aa19.55■□□□□ 0.72
VSX1-201ENST00000376707 ACOT4Q8N9L9 421 aa19.55■□□□□ 0.72
VSX1-201ENST00000376707 FAM57AQ8TBR7 257 aa19.55■□□□□ 0.72
VSX1-201ENST00000376707 PTPMT1Q8WUK0 201 aaPredicted RBP19.55■□□□□ 0.72
VSX1-201ENST00000376707 UBTD2Q8WUN7 234 aa19.55■□□□□ 0.72
VSX1-201ENST00000376707 DMRTA2Q96SC8 542 aa19.55■□□□□ 0.72
VSX1-201ENST00000376707 MAPKAP1Q9BPZ7 522 aa19.55■□□□□ 0.72
VSX1-201ENST00000376707 ACOT9Q9Y305 439 aa19.55■□□□□ 0.72
VSX1-201ENST00000376707 CCDC189A1A4V9 331 aa19.54■□□□□ 0.72
VSX1-201ENST00000376707 HMX2A2RU54 273 aa19.54■□□□□ 0.72
VSX1-201ENST00000376707 TMEM200CA6NKL6 621 aa19.54■□□□□ 0.72
VSX1-201ENST00000376707 C17orf105B2RV13 164 aa19.54■□□□□ 0.72
VSX1-201ENST00000376707 K7EPI3 171 aa19.54■□□□□ 0.72
VSX1-201ENST00000376707 UBXN8O00124 270 aa19.54■□□□□ 0.72
VSX1-201ENST00000376707 WWP2O00308 870 aa19.54■□□□□ 0.72
VSX1-201ENST00000376707 ADAM10O14672 748 aa19.54■□□□□ 0.72
VSX1-201ENST00000376707 LDB3O75112 727 aa19.54■□□□□ 0.72
VSX1-201ENST00000376707 URI1O94763 535 aaPredicted RBP19.54■□□□□ 0.72
VSX1-201ENST00000376707 OR6B1O95007 311 aa19.54■□□□□ 0.72
VSX1-201ENST00000376707 TGFB1P01137 390 aa19.54■□□□□ 0.72
VSX1-201ENST00000376707 HIST1H1TP22492 207 aaPredicted RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms