RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 SH3YL1Q96HL8 342 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-203ENST00000375274 ATOH8Q96SQ7 321 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 TTYH2Q9BSA4 534 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 DCAF13Q9NV06 445 aaKnown RBP11.08□□□□□ -0.64
PTCH1-203ENST00000375274 ERVK-11Q9UQG0 969 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 CDH10Q9Y6N8 788 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 OR2B3O76000 313 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 RENP00797 406 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 BPIP17213 487 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 CD9P21926 228 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 AKT2P31751 481 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 MAGEA2P43356 314 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 GATMP50440 423 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF81P51508 661 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 MLLT10P55197 1068 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 PDGFRLQ15198 375 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 TOR1AIP1Q5JTV8 583 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 FAAH2Q6GMR7 532 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 OR52E4Q8NGH9 312 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 HUS1BQ8NHY5 278 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 CCDC107Q8WV48 283 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 APIPQ96GX9 242 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 C12orf4Q9NQ89 552 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 TMEM98Q9Y2Y6 226 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 MAU2Q9Y6X3 613 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 LAMA4Q16363 1823 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 DNAJC25-GNG10A0A024R161 153 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 FXYD6-FXYD2A0A087WZ82 144 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 LEFTY1O75610 366 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 MAP3K8P41279 467 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 CCDC116Q8IYX3 515 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 PSD4Q8NDX1 1056 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 RFT1Q96AA3 541 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 INPP5KQ9BT40 448 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 CCDC32Q9BV29 185 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 FXYD6Q9H0Q3 95 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 SLC6A15Q9H2J7 730 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 PLEKHA1Q9HB21 404 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 KCNK6Q9Y257 313 aa11.08□□□□□ -0.64
PTCH1-203ENST00000375274 RBM7Q9Y580 266 aaKnown RBP11.08□□□□□ -0.64
PTCH1-203ENST00000375274 FLRT2O43155 660 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 GSTT2P0CG29 244 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 HOXD8P13378 290 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-203ENST00000375274 GABRB3P28472 473 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 CNR2P34972 360 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 VLDLRP98155 873 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 TLE2Q04725 743 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 UAP1L1Q3KQV9 507 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 MAVSQ7Z434 540 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 C6orf120Q7Z4R8 191 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 LSMEM2Q8N112 164 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 SDR16C5Q8N3Y7 309 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 TMEM102Q8N9M5 508 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-203ENST00000375274 GNPDA2Q8TDQ7 276 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 DNAJA4Q8WW22 397 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-203ENST00000375274 FATE1Q969F0 183 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 RHBDF1Q96CC6 855 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 TM9SF2Q99805 663 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 ABCG5Q9H222 651 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 IFT46Q9NQC8 304 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF69Q9UC07 566 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 SH3D21A4FU49 640 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 SOBPA7XYQ1 873 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 LEFTY2O00292 366 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF432O94892 652 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 ADH5P11766 374 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF26P17031 533 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-203ENST00000375274 PTNP21246 168 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 CRHBPP24387 322 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 TBPL1P62380 186 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 RPS26P62854 115 aaKnown RBP11.07□□□□□ -0.64
PTCH1-203ENST00000375274 MC1RQ01726 317 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 CES4AQ5XG92 561 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 PNCKQ6P2M8 343 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 FBXO42Q6P3S6 717 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 ZNF782Q6ZMW2 699 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-203ENST00000375274 TMEM151AQ8N4L1 468 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 CAMKVQ8NCB2 501 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 BBS10Q8TAM1 723 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 PROKR1Q8TCW9 393 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 CREB3L1Q96BA8 519 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 SLCO3A1Q9UIG8 710 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 MKL2Q9ULH7 1088 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 ENPP4Q9Y6X5 453 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 AKAP11Q9UKA4 1901 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 SCAMP2O15127 329 aaKnown RBP11.07□□□□□ -0.64
PTCH1-203ENST00000375274 SOD2P04179 222 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 DBIP07108 87 aaKnown RBP11.07□□□□□ -0.64
PTCH1-203ENST00000375274 IL7P13232 177 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 SLC9A3P48764 834 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 PUM1Q14671 1186 aaKnown RBP eCLIP11.07□□□□□ -0.64
PTCH1-203ENST00000375274 GTF2IRD2BQ6EKJ0 949 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 GTF2IRD2Q86UP8 949 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 PIAS4Q8N2W9 510 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-203ENST00000375274 PROKR2Q8NFJ6 384 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 NDNFQ8TB73 568 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 NEK7Q8TDX7 302 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 TAPBPLQ9BX59 468 aa11.07□□□□□ -0.64
PTCH1-203ENST00000375274 SMG9Q9H0W8 520 aaKnown RBP11.07□□□□□ -0.64
PTCH1-203ENST00000375274 SRRDQ9UH36 339 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms