RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 TBX6O95947 436 aaPredicted RBP16.25■□□□□ 0.19
RXRB-201ENST00000374680 ADRA2AP08913 450 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 CKMT1AP12532 417 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 MAT2AP31153 395 aaKnown RBP16.25■□□□□ 0.19
RXRB-201ENST00000374680 GGT2P36268 569 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 P2RY2P41231 377 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 PUM1Q14671 1186 aaKnown RBP eCLIP16.25■□□□□ 0.19
RXRB-201ENST00000374680 ZNF846Q147U1 533 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 SLC9B2Q86UD5 537 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 LRRC56Q8IYG6 542 aaPredicted RBP16.25■□□□□ 0.19
RXRB-201ENST00000374680 DOK4Q8TEW6 326 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 Q96MT0 163 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 IGFLR1Q9H665 355 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 MBNL1Q9NR56 388 aaKnown RBP16.25■□□□□ 0.19
RXRB-201ENST00000374680 WDR70Q9NW82 654 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 CORO2BQ9UQ03 480 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 SDK1Q7Z5N4 2213 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 SCN2AQ99250 2005 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 TRBV23OR9-2A0A075B6M9 112 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 PNMA8CA0A1B0GUJ8 204 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 TSPAN11A1L157 253 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 OR2A25A4D2G3 310 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 SLC22A1O15245 554 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 SULT1C4O75897 302 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 APOL3O95236 402 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 ACADLP28330 430 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 CNR2P34972 360 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 RXRGP48443 463 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 LIM2P55344 173 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 WDR53Q7Z5U6 358 aaPredicted RBP16.25■□□□□ 0.19
RXRB-201ENST00000374680 DSG4Q86SJ6 1040 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 PGBD3Q8N328 593 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 SLC38A5Q8WUX1 472 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 HTRA1Q92743 480 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 OR5M11Q96RB7 305 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 C17orf62Q9BQA9 187 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 CRISPLD2Q9H0B8 497 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 SACM1LQ9NTJ5 587 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 WDR37Q9Y2I8 494 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 GMEB1Q9Y692 573 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 OR52A4PA6NMU1 304 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 ATXN8OSP0DMR3 200 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 ZNF12P17014 697 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 PTX3P26022 381 aaPredicted RBP16.25■□□□□ 0.19
RXRB-201ENST00000374680 DDX6P26196 483 aaKnown RBP eCLIP16.25■□□□□ 0.19
RXRB-201ENST00000374680 TGFBR2P37173 567 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 BCAP31P51572 246 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 PTCHD4Q6ZW05 846 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 ERN2Q76MJ5 926 aaKnown RBP16.25■□□□□ 0.19
RXRB-201ENST00000374680 LAS2Q8IYD9 372 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 DYNC2LI1Q8TCX1 351 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 TMEM19Q96HH6 336 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 DACH2Q96NX9 599 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 FERD3LQ96RJ6 166 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 RAD9AQ99638 391 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 CAB39Q9Y376 341 aaPredicted RBP16.25■□□□□ 0.19
RXRB-201ENST00000374680 PCDHGA2Q9Y5H1 932 aa16.25■□□□□ 0.19
RXRB-201ENST00000374680 A0A1W2PS29 197 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 OR10H3O60404 316 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 B4GALT2O60909 372 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 SRPRAP08240 638 aaKnown RBP16.24■□□□□ 0.19
RXRB-201ENST00000374680 CDH3P22223 829 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 ITGB7P26010 798 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 GPC1P35052 558 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 GJA8P48165 433 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 HTRA4P83105 476 aaPredicted RBP16.24■□□□□ 0.19
RXRB-201ENST00000374680 SYPL1Q16563 259 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 FAM109BQ6ICB4 259 aaPredicted RBP16.24■□□□□ 0.19
RXRB-201ENST00000374680 NRSN1Q8IZ57 195 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 DNAJC22Q8N4W6 341 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 B3GNT7Q8NFL0 401 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 OR2L2Q8NH16 312 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 RHOXF1Q8NHV9 184 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 ZNF675Q8TD23 568 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 COL21A1Q96P44 957 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 CENPOQ9BU64 300 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 ITPAQ9BY32 194 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 OR52A5Q9H2C5 316 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 NMNAT1Q9HAN9 279 aaPredicted RBP16.24■□□□□ 0.19
RXRB-201ENST00000374680 EXOSC4Q9NPD3 245 aaKnown RBP16.24■□□□□ 0.19
RXRB-201ENST00000374680 DNAJC27Q9NZQ0 273 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 SERGEFQ9UGK8 458 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 PSORS1C1Q9UIG5 152 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 FFAR1O14842 300 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 MID1O15344 667 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 TMPRSS11DO60235 418 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 OR12D1P0DN82 309 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 TNNI3P19429 210 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 GTF2E2P29084 291 aaKnown RBP16.24■□□□□ 0.19
RXRB-201ENST00000374680 RELAQ04206 551 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 ELP6Q0PNE2 266 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 PIN1Q13526 163 aaPredicted RBP16.24■□□□□ 0.19
RXRB-201ENST00000374680 ELAVL3Q14576 367 aaKnown RBP16.24■□□□□ 0.19
RXRB-201ENST00000374680 ARMCX4Q5H9R4 360 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 DGLUCYQ7Z3D6 616 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 C6orf120Q7Z4R8 191 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 IQCF1Q8N6M8 205 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 QRSL1Q9H0R6 528 aaKnown RBP16.24■□□□□ 0.19
RXRB-201ENST00000374680 SLC6A17Q9H1V8 727 aa16.24■□□□□ 0.19
RXRB-201ENST00000374680 FZD3Q9NPG1 666 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms