RNA–Protein interactions for RNA: ENST00000374459.5

RASGEF1A-202, Transcript of RasGEF domain family member 1A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RASGEF1A, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1A-202ENST00000374459 SNX8Q9Y5X2 465 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 MYOFQ9NZM1 2061 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 CCDC88CQ9P219 2028 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 LAMA2P24043 3122 aaKnown RBP13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 RNASET2O00584 256 aaKnown RBP13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 SGTAO43765 313 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 TIA1P31483 386 aaKnown RBP eCLIP13.79□□□□□ -0.23e-8■■■■□ 26.7
RASGEF1A-202ENST00000374459 SOX6P35712 828 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 HTR2BP41595 481 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 BDKRB1P46663 353 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 BNC1Q01954 994 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 KCNC3Q14003 757 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 DOC2BQ14184 412 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 SPANXN2Q5MJ10 180 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 SYCE2Q6PIF2 218 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 RASGRP3Q8IV61 690 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 OR7G3Q8NG95 312 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 CHTF18Q8WVB6 975 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 KCNS3Q9BQ31 491 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 SLC35A5Q9BS91 424 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 ZNF556Q9HAH1 456 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 PNMA8CA0A1B0GUJ8 204 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 PLK4O00444 970 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 C6orf47O95873 294 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 CCR2P41597 374 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 RPS13P62277 151 aaKnown RBP13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 YIF1BQ5BJH7 314 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 METTL3Q86U44 580 aaKnown RBP13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 CCDC190Q86UF4 302 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 FIBINQ8TAL6 211 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 ASZ1Q8WWH4 475 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 DMRTB1Q96MA1 342 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 SAMD11Q96NU1 681 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 SDHCQ99643 169 aaPredicted RBP13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 TMEM121BQ9BXQ6 578 aaPredicted RBP13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 SLC46A2Q9BY10 475 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 THSD1Q9NS62 852 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 WBP1LQ9NX94 342 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 FBXL12Q9NXK8 326 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 LSM7Q9UK45 103 aaKnown RBP13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 MKLN1Q9UL63 735 aa13.79□□□□□ -0.2
RASGEF1A-202ENST00000374459 CTDSP2O14595 271 aa13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 KPNA5O15131 536 aa13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 GBAP04062 536 aa13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 GPLD1P80108 840 aa13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 GANABQ14697 944 aaKnown RBP13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 PTGES3Q15185 160 aaKnown RBP13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 METTL2AQ96IZ6 378 aaKnown RBP13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 MGLLQ99685 303 aa13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 TTYH2Q9BSA4 534 aa13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 C14orf119Q9NWQ9 140 aa13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 ZNF8P17098 575 aaPredicted RBP13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 GJA1P17302 382 aa13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 ETV6P41212 452 aa13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 PIK3CBP42338 1070 aa13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 AP2S1P53680 142 aaPredicted RBP13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 EIF2B5Q13144 721 aaKnown RBP13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 SPIN4Q56A73 249 aa13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 DPY19L3Q6ZPD9 716 aa13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 OTOP2Q7RTS6 562 aa13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 OR5AK3PQ8NH89 298 aa13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 C9orf43Q8TAL5 461 aaPredicted RBP13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 MRPS31Q92665 395 aaKnown RBP13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 ST6GAL2Q96JF0 529 aa13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 RIPOR3Q96MK2 946 aa13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 IL23AQ9NPF7 189 aa13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 ERVK13-1Q9NX77 482 aa13.78□□□□□ -0.2
RASGEF1A-202ENST00000374459 PRAMEF33A0A0G2JMD5 474 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 CXorf51AA0A1B0GTR3 108 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 TEX51A0A1B0GUA7 166 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 C12orf71A8MTZ7 269 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 LEFTY2O00292 366 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 SHOXO15266 292 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 PRAMEF10O60809 474 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 SNX4O95219 450 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 C8AP07357 584 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 PREPP48147 710 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 PRIM2P49643 509 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 DGKEP52429 567 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 CDC42P60953 191 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 MPPE1Q53F39 396 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 ZDHHC20Q5W0Z9 365 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 ZNF438Q7Z4V0 828 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 ATCAYQ86WG3 371 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 LILRA3Q8N6C8 439 aaPredicted RBP13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 OR52N2Q8NGI0 321 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 WDR36Q8NI36 951 aaKnown RBP13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 CIDECQ96AQ7 238 aaPredicted RBP13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 BHLHE41Q9C0J9 482 aaPredicted RBP13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 ACER3Q9NUN7 267 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 CFL2Q9Y281 166 aa13.77□□□□□ -0.2
RASGEF1A-202ENST00000374459 A0A1W2PRU2 124 aa13.77□□□□□ -0.21
RASGEF1A-202ENST00000374459 ARHGAP33O14559 1287 aa13.77□□□□□ -0.21
RASGEF1A-202ENST00000374459 MOSPD3O75425 235 aa13.77□□□□□ -0.21
RASGEF1A-202ENST00000374459 PSIP1O75475 530 aaKnown RBP13.77□□□□□ -0.21
RASGEF1A-202ENST00000374459 SLCO2B1O94956 709 aa13.77□□□□□ -0.21
RASGEF1A-202ENST00000374459 ITGA2P17301 1181 aa13.77□□□□□ -0.21
RASGEF1A-202ENST00000374459 TARDBPQ13148 414 aaKnown RBP eCLIP13.77□□□□□ -0.21
RASGEF1A-202ENST00000374459 STARD3Q14849 445 aa13.77□□□□□ -0.21
RASGEF1A-202ENST00000374459 NLRP8Q86W28 1048 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms