RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 PTCHD4Q6ZW05 846 aa12.16□□□□□ -0.46
CTPS1-202ENST00000372621 GDPD3Q7L5L3 318 aa12.16□□□□□ -0.46
CTPS1-202ENST00000372621 HEATR4Q86WZ0 1026 aa12.16□□□□□ -0.46
CTPS1-202ENST00000372621 SLC44A2Q8IWA5 706 aaPredicted RBP12.16□□□□□ -0.46
CTPS1-202ENST00000372621 CFAP206Q8IYR0 622 aa12.16□□□□□ -0.46
CTPS1-202ENST00000372621 ZNF557Q8N988 423 aaPredicted RBP12.16□□□□□ -0.46
CTPS1-202ENST00000372621 ZNF740Q8NDX6 193 aa12.16□□□□□ -0.46
CTPS1-202ENST00000372621 VN1R2Q8NFZ6 395 aa12.16□□□□□ -0.46
CTPS1-202ENST00000372621 TRNT1Q96Q11 434 aaKnown RBP12.16□□□□□ -0.46
CTPS1-202ENST00000372621 PRM3Q9NNZ6 103 aa12.16□□□□□ -0.46
CTPS1-202ENST00000372621 CFL2Q9Y281 166 aa12.16□□□□□ -0.46
CTPS1-202ENST00000372621 ITM2BQ9Y287 266 aa12.16□□□□□ -0.46
CTPS1-202ENST00000372621 TRBV4-1A0A0J9YWV2 114 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 FAM227AF5H4B4 570 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 SPINT1O43278 529 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 STARD3Q14849 445 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 MED22Q15528 200 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 POM121L1PQ3SYA9 428 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 LY6G5CQ5SRR4 150 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 REEP3Q6NUK4 255 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 CCDC149Q6ZUS6 474 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 AKAP14Q86UN6 197 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 FAM46DQ8NEK8 389 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 TCEAL4Q96EI5 215 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 COQ10AQ96MF6 247 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 OPALINQ96PE5 141 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 CREBZFQ9NS37 354 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 CLN6Q9NWW5 311 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 POU2F3Q9UKI9 436 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 A0A075B6Q4 140 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 MOSPD3O75425 235 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 GPX5O75715 221 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 TBX6O95947 436 aaPredicted RBP12.15□□□□□ -0.46
CTPS1-202ENST00000372621 ALDH9A1P49189 494 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 SNRPGP62308 76 aaKnown RBP12.15□□□□□ -0.46
CTPS1-202ENST00000372621 TIMM50Q3ZCQ8 353 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.15□□□□□ -0.46
CTPS1-202ENST00000372621 PARS2Q7L3T8 475 aaKnown RBP12.15□□□□□ -0.46
CTPS1-202ENST00000372621 GPR32P1Q8NGA4 272 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 DTD2Q96FN9 168 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 LRIG1Q96JA1 1093 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 CTRCQ99895 268 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 MIR1-1HGQ9H1L0 117 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 ITM2CQ9NQX7 267 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 OGDHLQ9ULD0 1010 aa12.15□□□□□ -0.46
CTPS1-202ENST00000372621 PSMD11O00231 422 aa12.15□□□□□ -0.47
CTPS1-202ENST00000372621 CCL16O15467 120 aa12.15□□□□□ -0.47
CTPS1-202ENST00000372621 SCG5P05408 212 aa12.15□□□□□ -0.47
CTPS1-202ENST00000372621 GSTT2P0CG29 244 aa12.15□□□□□ -0.47
CTPS1-202ENST00000372621 GSTT2BP0CG30 244 aa12.15□□□□□ -0.47
CTPS1-202ENST00000372621 ALOX12P18054 663 aa12.15□□□□□ -0.47
CTPS1-202ENST00000372621 SOAT1P35610 550 aa12.15□□□□□ -0.47
CTPS1-202ENST00000372621 SOX6P35712 828 aa12.15□□□□□ -0.47
CTPS1-202ENST00000372621 OPRD1P41143 372 aa12.15□□□□□ -0.47
CTPS1-202ENST00000372621 TMEM201Q5SNT2 666 aa12.15□□□□□ -0.47
CTPS1-202ENST00000372621 SAXO2Q658L1 398 aa12.15□□□□□ -0.47
CTPS1-202ENST00000372621 KREMEN2Q8NCW0 462 aa12.15□□□□□ -0.47
CTPS1-202ENST00000372621 SLC38A5Q8WUX1 472 aa12.15□□□□□ -0.47
CTPS1-202ENST00000372621 DHRS1Q96LJ7 313 aa12.15□□□□□ -0.47
CTPS1-202ENST00000372621 SORBS1Q9BX66 1292 aaKnown RBP12.15□□□□□ -0.47
CTPS1-202ENST00000372621 ZNF717Q9BY31 904 aaPredicted RBP12.15□□□□□ -0.47
CTPS1-202ENST00000372621 HHATLQ9HCP6 504 aa12.15□□□□□ -0.47
CTPS1-202ENST00000372621 A4GALTQ9NPC4 353 aa12.15□□□□□ -0.47
CTPS1-202ENST00000372621 SLAMF7Q9NQ25 335 aa12.15□□□□□ -0.47
CTPS1-202ENST00000372621 NOTCH4Q99466 2003 aa12.15□□□□□ -0.47
CTPS1-202ENST00000372621 PNMA8CA0A1B0GUJ8 204 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 ENTPD6O75354 484 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 ADAP00813 363 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 ENDOUP21128 410 aaKnown RBP12.14□□□□□ -0.47
CTPS1-202ENST00000372621 XPAP23025 273 aaPredicted RBP12.14□□□□□ -0.47
CTPS1-202ENST00000372621 ACADLP28330 430 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 RHAGQ02094 409 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 TSTA3Q13630 321 aaPredicted RBP12.14□□□□□ -0.47
CTPS1-202ENST00000372621 SEC23BQ15437 767 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 LEXMQ3ZCV2 418 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 RPS26P11Q5JNZ5 115 aaPredicted RBP12.14□□□□□ -0.47
CTPS1-202ENST00000372621 ERAP2Q6P179 960 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 FAM129CQ86XR2 697 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 WDR36Q8NI36 951 aaKnown RBP12.14□□□□□ -0.47
CTPS1-202ENST00000372621 NEURL3Q96EH8 262 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 HOXD1Q9GZZ0 328 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 FBXL12Q9NXK8 326 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 EHD3Q9NZN3 535 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 CARNS1A5YM72 827 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 K7ESM1 405 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 CTDSP2O14595 271 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 MFN2O95140 757 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 OSMP13725 252 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 CA8P35219 290 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 ILKQ13418 452 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 KRR1Q13601 381 aaKnown RBP12.14□□□□□ -0.47
CTPS1-202ENST00000372621 TP53BP2Q13625 1128 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 CARTPTQ16568 116 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 DEPDC1Q5TB30 811 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 FAM180BQ6P0A1 224 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 CCBE1Q6UXH8 406 aaPredicted RBP12.14□□□□□ -0.47
CTPS1-202ENST00000372621 CEACAM20Q6UY09 585 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 SLC9B2Q86UD5 537 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 ZNF547Q8IVP9 402 aa12.14□□□□□ -0.47
CTPS1-202ENST00000372621 HORMAD2Q8N7B1 307 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms