RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 SECISBP2Q96T21 854 aaKnown RBP15.31■□□□□ 0.04
COL17A1-202ENST00000369733 TTTY10Q9BZA0 68 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 PTNP21246 168 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 GKP32189 559 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 NRIP1P48552 1158 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 RCAN2Q14206 197 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 ANKRD54Q6NXT1 300 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 HAGHLQ6PII5 290 aaPredicted RBP15.31■□□□□ 0.04
COL17A1-202ENST00000369733 SUSD1Q6UWL2 747 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 Q6ZVU0 165 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 KIF18BQ86Y91 864 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 MMAAQ8IVH4 418 aaKnown RBP15.31■□□□□ 0.04
COL17A1-202ENST00000369733 DENND6BQ8NEG7 585 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 C3orf30Q96M34 536 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 SRMSQ9H3Y6 488 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 RNF121Q9H920 327 aa15.31■□□□□ 0.04
COL17A1-202ENST00000369733 MRPL3P09001 348 aaKnown RBP15.3■□□□□ 0.04
COL17A1-202ENST00000369733 ZNF30P17039 623 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 CLECL1Q8IZS7 167 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 ZFP41Q8N8Y5 198 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 OR5J2Q8NH18 312 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 INPP5KQ9BT40 448 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 TXNRD2Q9NNW7 524 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 MYH1P12882 1939 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 MYH4Q9Y623 1939 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 C8orf89P0DMQ9 161 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 JUPP14923 745 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 ELNP15502 786 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 OR3A3P47888 321 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 OR3A2P47893 321 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 LETMD1Q6P1Q0 360 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 CEACAM19Q7Z692 300 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 KCT2Q8NC54 265 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 OR51E2Q9H255 320 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 TMEM45AQ9NWC5 275 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 COMMD7Q86VX2 200 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 DCAF4L2Q8NA75 395 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 OR14C36Q8NHC7 312 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 FANK1Q8TC84 345 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 CFAP20Q9Y6A4 193 aaKnown RBP15.3■□□□□ 0.04
COL17A1-202ENST00000369733 SCGNO76038 276 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 MAGEA12P43365 314 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 FKBP1BP68106 108 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 FAM76BQ5HYJ3 339 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 OR6C4Q8NGE1 309 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 STOML3Q8TAV4 291 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 MZB1Q8WU39 189 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 ACTR6Q9GZN1 396 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 DCAF13Q9NV06 445 aaKnown RBP15.3■□□□□ 0.04
COL17A1-202ENST00000369733 DUS2Q9NX74 493 aaKnown RBP15.3■□□□□ 0.04
COL17A1-202ENST00000369733 ERVW-1Q9UQF0 538 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 PRKYO43930 277 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 NFATC1O95644 943 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 VAMP1P23763 118 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 CNR2P34972 360 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 MAD2L1BPQ15013 274 aaPredicted RBP15.3■□□□□ 0.04
COL17A1-202ENST00000369733 LRRN1Q6UXK5 716 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 BBS10Q8TAM1 723 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 HDHD5Q9BXW7 423 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 TAS2R3Q9NYW6 316 aa15.3■□□□□ 0.04
COL17A1-202ENST00000369733 ZNF821O75541 412 aaPredicted RBP15.29■□□□□ 0.04
COL17A1-202ENST00000369733 POP7O75817 140 aaKnown RBP15.29■□□□□ 0.04
COL17A1-202ENST00000369733 GNRH1P01148 92 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 OR12D1P0DN82 309 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 KCNA5P22460 613 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 FAM189BP81408 668 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 TRAM1Q15629 374 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 OR9A1PQ8NGU1 263 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 SMPDL3AQ92484 453 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 MCHR1Q99705 422 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 OLAHQ9NV23 265 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 YIPF1Q9Y548 306 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 SCAMP2O15127 329 aaKnown RBP15.29■□□□□ 0.04
COL17A1-202ENST00000369733 AP1G1O43747 822 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 KRT33AO76009 404 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 PGAM2P15259 253 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 HK3P52790 923 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 EFR3AQ14156 821 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 EIF5AL1Q6IS14 154 aaKnown RBP15.29■□□□□ 0.04
COL17A1-202ENST00000369733 MSANTD1Q6ZTZ1 278 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 MAVSQ7Z434 540 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 ACVR1CQ8NER5 493 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 OR5P2Q8WZ92 322 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 MAL2Q969L2 176 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 VAPAQ9P0L0 249 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 MGAT4CQ9UBM8 478 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 SCN11AQ9UI33 1791 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 IL3P08700 152 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 HNF1BP35680 557 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 ZNF691Q5VV52 312 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 CCSAPQ6IQ19 270 aaPredicted RBP15.29■□□□□ 0.04
COL17A1-202ENST00000369733 ACOT12Q8WYK0 555 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 ZNF471Q9BX82 626 aaPredicted RBP15.29■□□□□ 0.04
COL17A1-202ENST00000369733 METTL8Q9H825 291 aaKnown RBP15.29■□□□□ 0.04
COL17A1-202ENST00000369733 MGAT4AQ9UM21 535 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 PLAGL1Q9UM63 463 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 GPR45Q9Y5Y3 372 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 GRXCR2A6NFK2 248 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 SLC16A5O15375 505 aa15.29■□□□□ 0.04
COL17A1-202ENST00000369733 GATBO75879 557 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms