RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 KCNA7Q96RP8 456 aa21.02■□□□□ 0.96
ECHDC1-203ENST00000368291 SLC29A3Q9BZD2 475 aa21.02■□□□□ 0.96
ECHDC1-203ENST00000368291 BRF2Q9HAW0 419 aa21.02■□□□□ 0.96
ECHDC1-203ENST00000368291 MRPS33Q9Y291 106 aaKnown RBP21.02■□□□□ 0.96
ECHDC1-203ENST00000368291 STK38LQ9Y2H1 464 aa21.02■□□□□ 0.96
ECHDC1-203ENST00000368291 ATG4BQ9Y4P1 393 aa21.02■□□□□ 0.96
ECHDC1-203ENST00000368291 ASB4Q9Y574 426 aa21.02■□□□□ 0.96
ECHDC1-203ENST00000368291 CCDC151A5D8V7 595 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 CTNSO60931 367 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 CPN2P22792 545 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 PPP2R1BP30154 601 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 CASRP41180 1078 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 HTR6P50406 440 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 FOXA1P55317 472 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 SLC26A5P58743 744 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 RCN2Q14257 317 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 BEND6Q5SZJ8 279 aaPredicted RBP21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 B3GNTL1Q67FW5 361 aaPredicted RBP21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 PRICKLE2Q7Z3G6 844 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 CLNKQ7Z7G1 428 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 NFAM1Q8NET5 270 aaPredicted RBP21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 M1APQ8TC57 530 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 ZBTB9Q96C00 473 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 SMC6Q96SB8 1091 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 MFRPQ9BY79 579 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 MRPL1Q9BYD6 325 aaKnown RBP21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 TNFRSF12AQ9NP84 129 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 MID1IP1Q9NPA3 183 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 PTGFRNQ9P2B2 879 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 MID2Q9UJV3 735 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 TIMM22Q9Y584 194 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 CSAG2Q9Y5P2 127 aa21.01■□□□□ 0.95
ECHDC1-203ENST00000368291 A8MUA0 341 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 SLC28A2O43868 658 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 LDB3O75112 727 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 GBAP04062 536 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 PLA2G2AP14555 144 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 CHN1P15882 459 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 NAA20P61599 178 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 SLC13A2Q13183 592 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 MFAP5Q13361 173 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 EXT1Q16394 746 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 CRB2Q5IJ48 1285 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 CEP85LQ5SZL2 805 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 C18orf63Q68DL7 685 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 SLC6A19Q695T7 634 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 H3F3CQ6NXT2 135 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 JMJD6Q6NYC1 403 aaPredicted RBP21■□□□□ 0.95
ECHDC1-203ENST00000368291 ISLR2Q6UXK2 745 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 GPR180Q86V85 440 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 NUDT13Q86X67 352 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 METTL4Q8N3J2 472 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 Q8NA96 180 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 METTL6Q8TCB7 284 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 ANKRD9Q96BM1 317 aaPredicted RBP21■□□□□ 0.95
ECHDC1-203ENST00000368291 GATA5Q9BWX5 397 aaPredicted RBP21■□□□□ 0.95
ECHDC1-203ENST00000368291 IQCGQ9H095 443 aaKnown RBP21■□□□□ 0.95
ECHDC1-203ENST00000368291 EPN3Q9H201 632 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 MMP25Q9NPA2 562 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 MS4A12Q9NXJ0 267 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 SLC12A4Q9UP95 1085 aa21■□□□□ 0.95
ECHDC1-203ENST00000368291 CROCCQ5TZA2 2017 aa20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 SAGE2PA6NJ88 616 aa20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 RGS16O15492 202 aaPredicted RBP20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 PROM1O43490 865 aa20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 PRKRAO75569 313 aaKnown RBP20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 KRT6AP02538 564 aa20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 KRT6BP04259 564 aa20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 ENO1P06733 434 aaKnown RBP20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 TPP2P29144 1249 aaPredicted RBP20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 HMOX2P30519 316 aa20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 ALDH3A1P30838 453 aa20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 KRT6CP48668 564 aa20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 TNFRSF17Q02223 184 aa20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 GALNT1Q10472 559 aaPredicted RBP20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 TBL3Q12788 808 aaKnown RBP20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 ATG14Q6ZNE5 492 aa20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 LINC00696Q6ZRV3 163 aa20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 EXOC3L1Q86VI1 746 aa20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 EFCAB3Q8N7B9 438 aa20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 ELP5Q8TE02 316 aa20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 LMF1Q96S06 567 aa20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 MECRQ9BV79 373 aa20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 RRAGDQ9NQL2 400 aaPredicted RBP20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 SENP1Q9P0U3 644 aa20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 PHF11Q9UIL8 331 aa20.99■□□□□ 0.95
ECHDC1-203ENST00000368291 MYOCOSA0A1B0GUC4 107 aa20.98■□□□□ 0.95
ECHDC1-203ENST00000368291 A0A1W2PR48 441 aa20.98■□□□□ 0.95
ECHDC1-203ENST00000368291 BLACEA4D250 179 aa20.98■□□□□ 0.95
ECHDC1-203ENST00000368291 TRIM13O60858 407 aa20.98■□□□□ 0.95
ECHDC1-203ENST00000368291 SORBS2O94875 1100 aaKnown RBP20.98■□□□□ 0.95
ECHDC1-203ENST00000368291 FAM58BPP0C7Q3 252 aa20.98■□□□□ 0.95
ECHDC1-203ENST00000368291 HSD3B1P14060 373 aa20.98■□□□□ 0.95
ECHDC1-203ENST00000368291 HSD3B2P26439 372 aa20.98■□□□□ 0.95
ECHDC1-203ENST00000368291 AP2B1P63010 937 aa20.98■□□□□ 0.95
ECHDC1-203ENST00000368291 CFAP157Q5JU67 520 aa20.98■□□□□ 0.95
ECHDC1-203ENST00000368291 LRIG3Q6UXM1 1119 aa20.98■□□□□ 0.95
ECHDC1-203ENST00000368291 UCN3Q969E3 161 aa20.98■□□□□ 0.95
ECHDC1-203ENST00000368291 NPAS2Q99743 824 aa20.98■□□□□ 0.95
ECHDC1-203ENST00000368291 PNO1Q9NRX1 252 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms