RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 RHBGQ9H310 441 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 MTG2Q9H4K7 406 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 NMNAT1Q9HAN9 279 aaPredicted RBP13.63□□□□□ -0.23
CD48-201ENST00000368045 PELI2Q9HAT8 420 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 ZNF229Q9UJW7 825 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 MGAT4BQ9UQ53 548 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 WNT6Q9Y6F9 365 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 DSPPQ9NZW4 1301 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 C5orf58C9J3I9 102 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 J3KTA2 159 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 SPINT1O43278 529 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 POP7O75817 140 aaKnown RBP13.63□□□□□ -0.23
CD48-201ENST00000368045 MED26O95402 600 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 PAPLNO95428 1278 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 CHMP24386 653 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 SLC15A1P46059 708 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 GPR1P46091 355 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 DGKGP49619 791 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 SMIM11AP58511 58 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 RPA4Q13156 261 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 MAPK11Q15759 364 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 PRSS53Q2L4Q9 553 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 TMEM201Q5SNT2 666 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 MEDAGQ5VYS4 303 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 KLHL17Q6TDP4 642 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 PTCHD4Q6ZW05 846 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 VN1R5Q7Z5H4 357 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 FAM129CQ86XR2 697 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 TMIEQ8NEW7 156 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 GTPBP3Q969Y2 492 aaKnown RBP13.63□□□□□ -0.23
CD48-201ENST00000368045 RAD51AP1Q96B01 352 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 DHRS1Q96LJ7 313 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 Q96MT0 163 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 QRFPRQ96P65 431 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 ZDHHC5Q9C0B5 715 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 SPNS1Q9H2V7 528 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 CXorf36Q9H7Y0 433 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 NEUROD4Q9HD90 331 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 FZD3Q9NPG1 666 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 NDOR1Q9UHB4 597 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 MKLN1Q9UL63 735 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 TMCC3Q9ULS5 477 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 CFL2Q9Y281 166 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 LOC100506127A0A0U1RQW1 187 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 CCRL2O00421 344 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 ZW10O43264 779 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 RECKO95980 971 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 EIF2S1P05198 315 aaKnown RBP13.62□□□□□ -0.23
CD48-201ENST00000368045 CLTBP09497 229 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 OSMP13725 252 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 CXCR2P25025 360 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 HSD17B2P37059 387 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 RHAGQ02094 409 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 ARHGAP19Q14CB8 494 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 POM121L1PQ3SYA9 428 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 DEPDC1Q5TB30 811 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 RAET1GQ6H3X3 334 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 RASSF5Q8WWW0 418 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 UCK2Q9BZX2 261 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 PITHD1Q9GZP4 211 aaPredicted RBP13.62□□□□□ -0.23
CD48-201ENST00000368045 RNF208Q9H0X6 261 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 OR51E2Q9H255 320 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 SIAEQ9HAT2 523 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 ABCB10Q9NRK6 738 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 ATP11BQ9Y2G3 1177 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 SLC27A6Q9Y2P4 619 aa13.62□□□□□ -0.23
CD48-201ENST00000368045 LOC110117498-PIK3R3F6TDL0 507 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 FAAHO00519 579 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 HOXC11O43248 304 aaPredicted RBP13.61□□□□□ -0.23
CD48-201ENST00000368045 MMP20O60882 483 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 GASTP01350 101 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 LINC00271P0C7V0 271 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 ERGP11308 486 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 CCL5P13501 91 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 GRK5P34947 590 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 ILKQ13418 452 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 DHCR24Q15392 516 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 IER5LQ5T953 404 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 KHDRBS2Q5VWX1 349 aaKnown RBP13.61□□□□□ -0.23
CD48-201ENST00000368045 SLX4IPQ5VYV7 408 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 RNLSQ5VYX0 342 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 STEAP3Q658P3 488 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 CEACAM20Q6UY09 585 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 GDPGP1Q6ZNW5 385 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 PDZD3Q86UT5 571 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 TRIM69Q86WT6 500 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 ZNF547Q8IVP9 402 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 DCUN1D3Q8IWE4 304 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 PIK3R3Q92569 461 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 EFHD2Q96C19 240 aaPredicted RBP13.61□□□□□ -0.23
CD48-201ENST00000368045 TXNDC15Q96J42 360 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 TEFMQ96QE5 360 aaKnown RBP13.61□□□□□ -0.23
CD48-201ENST00000368045 MGLLQ99685 303 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 OR52A5Q9H2C5 316 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 NT5DC2Q9H857 520 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 SLC25A19Q9HC21 320 aa13.61□□□□□ -0.23
CD48-201ENST00000368045 CRNNQ9UBG3 495 aaPredicted RBP13.61□□□□□ -0.23
CD48-201ENST00000368045 NUP214P35658 2090 aaPredicted RBP13.61□□□□□ -0.23
CD48-201ENST00000368045 A0A075B6Q4 140 aa13.6□□□□□ -0.23
CD48-201ENST00000368045 HAT1O14929 419 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms