RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 TPSB2P20231 275 aa10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 SLC26A5P58743 744 aa10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 GTF2H2Q13888 395 aa10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 TPSAB1Q15661 275 aa10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 C14orf28Q4W4Y0 310 aa10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 GTF2H2CQ6P1K8 395 aa10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 GALNT13Q8IUC8 556 aa10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 GTPBP8Q8N3Z3 284 aaPredicted RBP10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 SLC13A3Q8WWT9 602 aa10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 ARFGEF3Q5TH69 2177 aa10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 TEX13DA0A0J9YY54 714 aaPredicted RBP10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 SULT1C4O75897 302 aa10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 DPEP1P16444 411 aa10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 GIFP27352 417 aa10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 GMPRP36959 345 aa10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 DPY19L4Q7Z388 723 aa10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 HID1Q8IV36 788 aa10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 JAGN1Q8N5M9 183 aa10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 TXNDC5Q8NBS9 432 aaKnown RBP10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 LPPQ93052 612 aa10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 OTUB2Q96DC9 234 aa10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 HMX1Q9NP08 348 aaPredicted RBP10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 RHCGQ9UBD6 479 aa10.69□□□□□ -0.7
CDC42BPA-205ENST00000366769 ARPC1BO15143 372 aaKnown RBP10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 RETP07949 1114 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 METTL3Q86U44 580 aaKnown RBP10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 ZNF527Q8NB42 609 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 PROKR2Q8NFJ6 384 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 TFAP2CQ92754 450 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 EP300Q09472 2414 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 LOC102723532A0A0G2JNH3 316 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 A0A1W2PPK0 400 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 CCL16O15467 120 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 MAD2L1BPQ15013 274 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 C9orf152Q5JTZ5 239 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 NAPRTQ6XQN6 538 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 PHF13Q86YI8 300 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 KRBOX1C9JBD0 128 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 HOXB8P17481 243 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 SGTBQ96EQ0 304 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 PKP4Q99569 1192 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 TINAGL1Q9GZM7 467 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 ATG13O75143 517 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 APODP05090 189 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 SFTPBP07988 381 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 CERS1P27544 350 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 INHBEP58166 350 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 RNF4P78317 190 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 INTS6LQ5JSJ4 861 aaKnown RBP10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 C18orf63Q68DL7 685 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 SSX7Q7RTT5 188 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 LAS2Q8IYD9 372 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 GLIS1Q8NBF1 620 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 FRS2Q8WU20 508 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 PKMYT1Q99640 499 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 RRAGCQ9HB90 399 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 TDRD6O60522 2096 aaKnown RBP10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 ARFGEF2Q9Y6D5 1785 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 RAB36O95755 333 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 SELPLGQ14242 412 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 GINS1Q14691 196 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 TEX44Q53QW1 395 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 C7orf43Q8WVR3 580 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 CACNG6Q9BXT2 260 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 NWD1Q149M9 1564 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 TMEM235A6NFC5 223 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 ELOA3DA6NLF2 546 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 ELOA3BQ3SY89 546 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 ELOA3Q8NG57 546 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 WNT8BQ93098 351 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 SLC6A7Q99884 636 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 POM121BA6NF01 834 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 BHLHE40O14503 412 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 CSTBP04080 98 aaKnown RBP10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 VEGFAP15692 232 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 SLC28A3Q9HAS3 691 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 CLDN5O00501 218 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 KHNYNO15037 678 aaKnown RBP10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 UBXN7O94888 489 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 RHCEP18577 417 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 FLI1Q01543 452 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 SLC27A1Q6PCB7 646 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 HHIPL2Q6UWX4 724 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 HPSE2Q8WWQ2 592 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 LCN9Q8WX39 176 aa10.68□□□□□ -0.7
CDC42BPA-205ENST00000366769 NEMP2A6NFY4 417 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 SLC31A1O15431 190 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 TYROBPO43914 113 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 CXCL14O95715 111 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 CFIP05156 583 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 SLC26A2P50443 739 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 BACE1P56817 501 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 GRIK2Q13002 908 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 KLHL22Q53GT1 634 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 PHF19Q5T6S3 580 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 C9orf43Q8TAL5 461 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 MROQ9BYG7 248 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 TM9SF3Q9HD45 589 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 ATP13A2Q9NQ11 1180 aa10.67□□□□□ -0.7
CDC42BPA-205ENST00000366769 TLR6Q9Y2C9 796 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms