RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 DGKGP49619 791 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 HNRNPFP52597 415 aaKnown RBP13.09□□□□□ -0.31
SGMS1-202ENST00000361781 RPL6Q02878 288 aaKnown RBP13.09□□□□□ -0.31
SGMS1-202ENST00000361781 OR2G6Q5TZ20 316 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 B3GLCTQ6Y288 498 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 CHST9Q7L1S5 443 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 COMMD6Q7Z4G1 85 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.09□□□□□ -0.31
SGMS1-202ENST00000361781 HOMEZQ8IX15 550 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 MSRB3Q8IXL7 192 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 OR6C4Q8NGE1 309 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 ING5Q8WYH8 240 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 KLK6Q92876 244 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 CCDC115Q96NT0 180 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 DOK1Q99704 481 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 GAL3ST1Q99999 423 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 NTMT1Q9BV86 223 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 MND1Q9BWT6 205 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 PLSCR3Q9NRY6 295 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 SEC14L4Q9UDX3 406 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 MED16Q9Y2X0 877 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 ANKRD31Q8N7Z5 1873 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 LTBP3Q9NS15 1303 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 OR2A25A4D2G3 310 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 PDPK1O15530 556 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 CLEC2LP0C7M8 214 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 HOXD10P28358 340 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 TIA1P31483 386 aaKnown RBP eCLIP13.09□□□□□ -0.315e-6■□□□□ 8.4
SGMS1-202ENST00000361781 MAP4K2Q12851 820 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 SLC5A12Q1EHB4 618 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 LDLRAD1Q5T700 205 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 KDM4DQ6B0I6 523 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 REEP3Q6NUK4 255 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 BHLHB9Q6PI77 547 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 ZNF852Q6ZMS4 543 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 ZNF367Q7RTV3 350 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 TMEM173Q86WV6 379 aaPredicted RBP13.09□□□□□ -0.31
SGMS1-202ENST00000361781 LILRB4Q8NHJ6 448 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 LRRC20Q8TCA0 184 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 WBP2Q969T9 261 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 COQ8BQ96D53 544 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 MS4A4AQ96JQ5 239 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 KATNBL1Q9H079 304 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 SIRT5Q9NXA8 310 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 MAT2BQ9NZL9 334 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 PCDHGA6Q9Y5G7 932 aa13.09□□□□□ -0.31
SGMS1-202ENST00000361781 C2orf92A0A1B0GVN3 265 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 GLTPD2A6NH11 291 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 SMLR1H3BR10 107 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 M0R3H8 397 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 SCAMP2O15127 329 aaKnown RBP13.08□□□□□ -0.32
SGMS1-202ENST00000361781 INPPL1O15357 1258 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 TSPAN9O75954 239 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 FGBP02675 491 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 SLC3A1Q07837 685 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 MICAQ29983 383 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 LRIT3Q3SXY7 679 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 SPIN4Q56A73 249 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 HSDL2Q6YN16 418 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 WFDC5Q8TCV5 224 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 USP7Q93009 1102 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 UBE2E3Q969T4 207 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 ZNF558Q96NG5 402 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 MEN1O00255 615 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 CYP17A1P05093 508 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 OR12D1P0DN82 309 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 CRISP3P54108 245 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 TIAL1Q01085 375 aaKnown RBP eCLIP13.08□□□□□ -0.32
SGMS1-202ENST00000361781 ZNF267Q14586 743 aaPredicted RBP13.08□□□□□ -0.32
SGMS1-202ENST00000361781 CBX2Q14781 532 aaPredicted RBP13.08□□□□□ -0.32
SGMS1-202ENST00000361781 ZNF791Q3KP31 576 aaPredicted RBP13.08□□□□□ -0.32
SGMS1-202ENST00000361781 ZMAT1Q5H9K5 638 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 MTFR2Q6P444 385 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 SERPINA11Q86U17 422 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 SNAPC3Q92966 411 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 VMP1Q96GC9 406 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 ASAH2Q9NR71 780 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 EIF3KQ9UBQ5 218 aaKnown RBP13.08□□□□□ -0.32
SGMS1-202ENST00000361781 CLDN24A6NM45 220 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 INMT-MINDY4F8WBC2 141 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 IL7P13232 177 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 ATF6P18850 670 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 CXCR4P61073 352 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 CCSMST1Q4G0I0 132 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 FRMPD2BQ6IN97 320 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 TMIGD1Q6UXZ0 262 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 GDPD4Q6W3E5 623 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 SLC46A3Q7Z3Q1 461 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 MRPL10Q7Z7H8 261 aaKnown RBP13.08□□□□□ -0.32
SGMS1-202ENST00000361781 NPAS4Q8IUM7 802 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 CDK20Q8IZL9 346 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 EFHD2Q96C19 240 aaPredicted RBP13.08□□□□□ -0.32
SGMS1-202ENST00000361781 PAWRQ96IZ0 340 aaKnown RBP13.08□□□□□ -0.32
SGMS1-202ENST00000361781 F2RL3Q96RI0 385 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 ANKHQ9HCJ1 492 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 PSORS1C1Q9UIG5 152 aa13.08□□□□□ -0.32
SGMS1-202ENST00000361781 GRM6O15303 877 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 RB1P06400 928 aa13.07□□□□□ -0.32
SGMS1-202ENST00000361781 PTX3P26022 381 aaPredicted RBP13.07□□□□□ -0.32
SGMS1-202ENST00000361781 AOAHP28039 575 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms