RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 EFSO43281 561 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 PCDH7O60245 1069 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 PRMT3O60678 531 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 CTNSO60931 367 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 SKAP2O75563 359 aaPredicted RBP13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 UMODP07911 640 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 ANXA4P09525 319 aaPredicted RBP13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 PRR35P0CG20 571 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 ALOX15P16050 662 aaPredicted RBP13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 EMP2P54851 167 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 OLR1P78380 273 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 RAE1P78406 368 aaKnown RBP13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 EMX2Q04743 252 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 ZNF763Q0D2J5 394 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 HEPACAMQ14CZ8 416 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 PDCD2Q16342 344 aaPredicted RBP13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 TMEM205Q6UW68 189 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 SCUBE1Q8IWY4 988 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 FAM9CQ8IZT9 166 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 ADAMTS17Q8TE56 1095 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 METTL21AQ8WXB1 218 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 TM4SF18Q96CE8 201 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 TUBGCP3Q96CW5 907 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 MAELQ96JY0 434 aaKnown RBP13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 C3orf30Q96M34 536 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 CATSPER2Q96P56 530 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 DCBLD2Q96PD2 775 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 CRB3Q9BUF7 120 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 VN1R1Q9GZP7 353 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 SOX17Q9H6I2 414 aaPredicted RBP13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 RPF2Q9H7B2 306 aaKnown RBP13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 SLCO1B3Q9NPD5 702 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 ASIC5Q9NY37 505 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 C19orf25Q9UFG5 118 aaPredicted RBP13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 FBXW2Q9UKT8 454 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 MKL2Q9ULH7 1088 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 ATG4BQ9Y4P1 393 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 PTGDR2Q9Y5Y4 395 aa13.02□□□□□ -0.33
NSMCE1-201ENST00000361439 CELSR3Q9NYQ7 3312 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 K7ENP7 123 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 EDF1O60869 148 aaKnown RBP13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 DNAJB6O75190 326 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 ALOX12BO75342 701 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 NR2F6P10588 404 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 PRPS2P11908 318 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 ASMTP46597 345 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 HNRNPH2P55795 449 aaKnown RBP13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 RHAGQ02094 409 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 GUCY1A3Q02108 690 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 SERTAD2Q14140 314 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 MINDY4Q4G0A6 757 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 RFTN2Q52LD8 501 aaPredicted RBP13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 C6orf136Q5SQH8 315 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 NDUFAF5Q5TEU4 345 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 OGFOD2Q6N063 350 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 INO80CQ6PI98 192 aaPredicted RBP13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 LAPTM4BQ86VI4 370 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 EFCAB3Q8N7B9 438 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.01□□□□□ -0.332e-6■■■■■ 26.8
NSMCE1-201ENST00000361439 ACTRT2Q8TDY3 377 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 ZNF764Q96H86 408 aaPredicted RBP13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 NUF2Q9BZD4 464 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 MYNNQ9NPC7 610 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 FAM53CQ9NYF3 392 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 EHD3Q9NZN3 535 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 PSME2Q9UL46 239 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 MAPRE3Q9UPY8 281 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 EIF3LQ9Y262 564 aaKnown RBP13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 USH1CQ9Y6N9 552 aa13.01□□□□□ -0.33
NSMCE1-201ENST00000361439 SCN3AQ9NY46 2000 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 LOC102723996A0A087X1L8 192 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 IGKV3D-11A0A0A0MRZ8 115 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 ATP6AP2A0A1C7CYW4 349 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 A0A1W2PR48 441 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 TCP11X1B4DZS4 312 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 ZNF195O14628 629 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 B4GALT2O60909 372 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 PEX11AO75192 247 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 ATP6AP2O75787 350 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 GBAP04062 536 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 JUNP05412 331 aaKnown RBP13□□□□□ -0.33
NSMCE1-201ENST00000361439 C8orf89P0DMQ9 161 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 KITP10721 976 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 DDX5P17844 614 aaKnown RBP13□□□□□ -0.33
NSMCE1-201ENST00000361439 LBPP18428 481 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 RPS18P62269 152 aaKnown RBP13□□□□□ -0.33
NSMCE1-201ENST00000361439 ERVK-8P63133 956 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 RPL38P63173 70 aaKnown RBP13□□□□□ -0.33
NSMCE1-201ENST00000361439 IRX1P78414 480 aaPredicted RBP13□□□□□ -0.33
NSMCE1-201ENST00000361439 IGLV3-21P80748 117 aaPredicted RBP13□□□□□ -0.33
NSMCE1-201ENST00000361439 VAC14Q08AM6 782 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 NSDHLQ15738 373 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 GALNTL6Q49A17 601 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 MFSD4BQ5TF39 518 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 FAM219BQ5XKK7 198 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 OR52E8Q6IFG1 317 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 LARP4Q71RC2 724 aaKnown RBP eCLIP13□□□□□ -0.335e-6■■■■□ 21.7
NSMCE1-201ENST00000361439 SAMD14Q8IZD0 417 aaPredicted RBP13□□□□□ -0.33
NSMCE1-201ENST00000361439 TMEM132CQ8N3T6 1108 aa13□□□□□ -0.33
NSMCE1-201ENST00000361439 FAM47BQ8NA70 645 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms