RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 ARHGEF15O94989 841 aa15.66■□□□□ 0.1
SCAF1-201ENST00000360565 CTSAP10619 480 aa15.66■□□□□ 0.1
SCAF1-201ENST00000360565 RHCEP18577 417 aa15.66■□□□□ 0.1
SCAF1-201ENST00000360565 AKT2P31751 481 aa15.66■□□□□ 0.1
SCAF1-201ENST00000360565 POLR2IP36954 125 aaKnown RBP15.66■□□□□ 0.1
SCAF1-201ENST00000360565 BMXP51813 675 aa15.66■□□□□ 0.1
SCAF1-201ENST00000360565 LIPKQ5VXJ0 399 aa15.66■□□□□ 0.1
SCAF1-201ENST00000360565 METTL2BQ6P1Q9 378 aaKnown RBP15.66■□□□□ 0.1
SCAF1-201ENST00000360565 BORAQ6PGQ7 559 aa15.66■□□□□ 0.1
SCAF1-201ENST00000360565 CAMKVQ8NCB2 501 aa15.66■□□□□ 0.1
SCAF1-201ENST00000360565 C16orf78Q8WTQ4 265 aa15.66■□□□□ 0.1
SCAF1-201ENST00000360565 SLC46A2Q9BY10 475 aa15.66■□□□□ 0.1
SCAF1-201ENST00000360565 OLAHQ9NV23 265 aa15.66■□□□□ 0.1
SCAF1-201ENST00000360565 SEC14L4Q9UDX3 406 aa15.66■□□□□ 0.1
SCAF1-201ENST00000360565 LOXHD1Q8IVV2 1947 aa15.66■□□□□ 0.1
SCAF1-201ENST00000360565 IGLON5A6NGN9 336 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 ZNF860A6NHJ4 632 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 NUAK1O60285 661 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 CTSCP53634 463 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 CES4AQ5XG92 561 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 RTN4RL1Q86UN2 441 aaPredicted RBP15.65■□□□□ 0.1
SCAF1-201ENST00000360565 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.65■□□□□ 0.1
SCAF1-201ENST00000360565 LKAAEAR1Q8TD35 194 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 NEIL2Q969S2 332 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 TEX37Q96LM6 180 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 KCNK12Q9HB15 430 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 ANKHQ9HCJ1 492 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 MRTO4Q9UKD2 239 aaKnown RBP15.65■□□□□ 0.1
SCAF1-201ENST00000360565 A0A1W2PP55 124 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 VEGFDO43915 354 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 AGR2O95994 175 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 HLA-DPB1P04440 258 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 CELP19835 753 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 TRAM2Q15035 370 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 ADNP2Q6IQ32 1131 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 ASB18Q6ZVZ8 466 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.65■□□□□ 0.1
SCAF1-201ENST00000360565 ZNF583Q96ND8 569 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 TRNT1Q96Q11 434 aaKnown RBP15.65■□□□□ 0.1
SCAF1-201ENST00000360565 NECTIN3Q9NQS3 549 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 ZSCAN32Q9NX65 697 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 ACADLP28330 430 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 MNDAP41218 407 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 GRK6P43250 576 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 CLK3P49761 638 aaKnown RBP15.65■□□□□ 0.1
SCAF1-201ENST00000360565 CLCN7P51798 805 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 RHAGQ02094 409 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 MPP7Q5T2T1 576 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 OR8J1Q8NGP2 316 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 MOSPD2Q8NHP6 518 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 SETD7Q8WTS6 366 aaKnown RBP15.65■□□□□ 0.1
SCAF1-201ENST00000360565 NCSTNQ92542 709 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 TMEM19Q96HH6 336 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 RAD9AQ99638 391 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 CLMPQ9H6B4 373 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 AKAP7Q9P0M2 348 aaPredicted RBP15.65■□□□□ 0.1
SCAF1-201ENST00000360565 LTBP4Q8N2S1 1624 aa15.65■□□□□ 0.1
SCAF1-201ENST00000360565 ZNF821O75541 412 aaPredicted RBP15.64■□□□□ 0.1
SCAF1-201ENST00000360565 TFPIP10646 304 aa15.64■□□□□ 0.1
SCAF1-201ENST00000360565 SLC39A5Q6ZMH5 540 aa15.64■□□□□ 0.1
SCAF1-201ENST00000360565 RFLNAQ6ZTI6 216 aa15.64■□□□□ 0.1
SCAF1-201ENST00000360565 PRSS48Q7RTY5 328 aa15.64■□□□□ 0.1
SCAF1-201ENST00000360565 ADGRD2Q7Z7M1 963 aa15.64■□□□□ 0.1
SCAF1-201ENST00000360565 FBXO15Q8NCQ5 510 aaPredicted RBP15.64■□□□□ 0.1
SCAF1-201ENST00000360565 HMGB4Q8WW32 186 aa15.64■□□□□ 0.1
SCAF1-201ENST00000360565 ASB11Q8WXH4 323 aa15.64■□□□□ 0.1
SCAF1-201ENST00000360565 CD300AQ9UGN4 299 aa15.64■□□□□ 0.1
SCAF1-201ENST00000360565 ATE1O95260 518 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 HLA-FP30511 346 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 PPP2R2BQ00005 443 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 GRIN2CQ14957 1233 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 SPHARQ15513 63 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 SBSNQ6UWP8 590 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 ZNF517Q6ZMY9 492 aaPredicted RBP15.64■□□□□ 0.09
SCAF1-201ENST00000360565 PRR23CQ6ZRP0 262 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 OR9Q2Q8NGE9 314 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 CD180Q99467 661 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 DPH7Q9BTV6 452 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 MARCH5Q9NX47 278 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 HEMK1Q9Y5R4 338 aaPredicted RBP15.64■□□□□ 0.09
SCAF1-201ENST00000360565 ENPP4Q9Y6X5 453 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 ANHXE9PGG2 379 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 OR7A17O14581 309 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 CSF2P04141 144 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 MMP2P08253 660 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 MC1RQ01726 317 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 GRSF1Q12849 480 aaKnown RBP eCLIP15.64■□□□□ 0.09
SCAF1-201ENST00000360565 SLAMF1Q13291 335 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 TOMM20Q15388 145 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 C5orf34Q96MH7 638 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 SLC38A3Q99624 504 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 NAA50Q9GZZ1 169 aaKnown RBP15.64■□□□□ 0.09
SCAF1-201ENST00000360565 MOV10Q9HCE1 1003 aaKnown RBP15.64■□□□□ 0.09
SCAF1-201ENST00000360565 ZNF334Q9HCZ1 680 aaPredicted RBP15.64■□□□□ 0.09
SCAF1-201ENST00000360565 KIAA0513O60268 411 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 HOXB2P14652 356 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 AOAHP28039 575 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 OPRL1P41146 370 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 DEFB103AP81534 67 aa15.64■□□□□ 0.09
SCAF1-201ENST00000360565 SLC27A4Q6P1M0 643 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms